Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00002G05870	Amborella trichopoda	7e-148	416	198	100.00
AT4G14710	Arabidopsis thaliana	2e-98	291	184	71.20
AT4G14716	Arabidopsis thaliana	2e-96	285	184	71.20
ATR_00002G05880	Amborella trichopoda	6e-95	281	191	68.06
OS03G06620	Oryza sativa	1e-93	278	191	67.02
AT2G26400	Arabidopsis thaliana	6e-93	276	185	68.65
PP00065G01480	Physcomitrella patens	6e-93	277	176	68.75
PP00069G00160	Physcomitrella patens	2e-91	273	176	68.75
PP00111G00090	Physcomitrella patens	4e-91	272	181	67.96
AT5G43850	Arabidopsis thaliana	4e-88	264	189	64.02
OS10G28350	Oryza sativa	2e-87	263	187	62.03
AC00G24350	Asterochloris sp. Cgr-DA1pho v2.0	2e-81	248	177	62.71
CV00G78170	Coccomyxa subellipsoidea C-169	4e-81	246	188	62.23
CR12G16690	Chlamydomonas reinhardtii	2e-80	245	177	60.45
ENSMUSG00000020629	Mus musculus	1e-78	239	176	63.64
VC00G42840	Volvox carteri	2e-78	240	176	61.93
ES0058G00300	Ectocarpus siliculosus	5e-78	238	176	62.50
ENSG00000182551	Homo sapiens	3e-77	236	172	63.37
OS10G28360	Oryza sativa	1e-76	234	186	60.22
PI00G54910	Picochlorum sp. SENEW3 (SE3)	8e-73	226	182	59.34
RCC4223.03g03920	Picochlorum_RCC4223	3e-71	221	182	57.69
CNC64A_003G01510	Chlorella sp NC64A	2e-70	218	179	55.31
FBgn0052068	Drosophila melanogaster	1e-68	214	173	56.07
OS04G27830	Oryza sativa	4e-64	206	198	51.52
Naga_100213g6	Nannochloropsis gaditana	3e-63	202	160	60.00
PTI_01G10200	Phaeodactylum tricornutum	9e-63	201	181	51.38
TP14G01420	Thalassiosira pseudonana	6e-59	190	191	46.60
FC008G07820	Fragilariopsis cylindrus	1e-56	186	191	45.55
AP00G25360	Auxenochlorella protothecoides	6e-55	178	178	50.00
PP00001G02960	Physcomitrella patens	2e-52	174	184	46.74
HE0000G29740	Helicosporidium sp.	3e-52	171	130	60.00
PP00052G00880	Physcomitrella patens	3e-50	169	184	46.74
CM17G03690	Cyanidioschyzon merolae	5e-50	167	184	45.65
PP00247G00180	Physcomitrella patens	7e-50	167	184	45.11
FC003G09220	Fragilariopsis cylindrus	2e-44	152	186	40.86
ENSG00000280830	Homo sapiens	3e-43	146	93	68.82
YMR009W	Saccharomyces cerevisiae strain S288C	1e-42	147	172	45.35
PP00032G01330	Physcomitrella patens	2e-42	152	187	41.18
DDB_G0291376	Dictyostelium discoideum	1e-36	131	135	45.93
WBGene00009636	Caenorhabditis elegans	3e-33	122	172	36.05
SPBC887.01	Schizosaccharomyces pombe	2e-31	118	174	39.08
WBGene00020149	Caenorhabditis elegans	3e-27	107	151	34.44
WBGene00019489	Caenorhabditis elegans	1e-22	94.7	154	32.47
FC003G10270	Fragilariopsis cylindrus	3e-21	89.7	121	38.84
PP00006G01530	Physcomitrella patens	4e-12	65.9	78	41.03

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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