Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G66040	Arabidopsis thaliana	3e-85	251	121	100.00
ATR_00001G01640	Amborella trichopoda	3e-47	154	111	65.77
AT4G35770	Arabidopsis thaliana	1e-46	155	118	61.86
OS06G50930	Oryza sativa	5e-44	147	112	61.61
PP00081G00640	Physcomitrella patens	4e-39	135	114	56.14
PP00001G00600	Physcomitrella patens	4e-35	126	110	54.55
OS02G01220	Oryza sativa	2e-32	117	116	51.72
AT5G66170	Arabidopsis thaliana	1e-31	114	112	50.89
OS04G17660	Oryza sativa	9e-31	113	108	51.85
ATR_00018G01210	Amborella trichopoda	9e-31	115	110	50.00
AT2G21045	Arabidopsis thaliana	2e-27	105	108	46.30
CR10G05780	Chlamydomonas reinhardtii	7e-26	100	113	43.36
VC00G87170	Volvox carteri	2e-25	99.4	98	47.96
AT2G17850	Arabidopsis thaliana	3e-25	99.0	113	43.36
PI00G38740	Picochlorum sp. SENEW3 (SE3)	3e-22	91.3	118	42.37
OS02G06290	Oryza sativa	3e-22	91.3	97	44.33
gsu98730	Galdieria sulphuraria	1e-21	89.4	106	40.57
RCC4223.02g11355	Picochlorum_RCC4223	3e-21	89.4	118	42.37
ES0080G00090	Ectocarpus siliculosus	3e-21	87.4	101	42.57
CNC64A_016G01400	Chlorella sp NC64A	7e-21	86.3	101	44.55
gsu13530	Galdieria sulphuraria	1e-18	80.5	94	40.43
AA0005G02070	Aureococcus anophagefferens	4e-18	78.6	92	40.22
AC00G80510	Asterochloris sp. Cgr-DA1pho v2.0	4e-18	80.1	108	41.67
CNC64A_016G01410	Chlorella sp NC64A	7e-18	79.0	115	38.26
OS12G24020	Oryza sativa	8e-18	79.3	99	47.47
CNC64A_016G01370	Chlorella sp NC64A	2e-17	77.4	121	39.67
ccr141380	Chondrus crispus	4e-16	76.6	112	39.29
BPRRCC1105_08G04060	Bathycoccus prasinos	7e-16	74.3	91	39.56
CV00G82930	Coccomyxa subellipsoidea C-169	1e-14	70.5	113	34.51
CM17G04660	Cyanidioschyzon merolae	4e-13	66.6	91	37.36
HE0000G46360	Helicosporidium sp.	4e-12	63.5	110	39.09
AP00G06010	Auxenochlorella protothecoides	1e-11	61.6	112	34.82
ATR_00027G00800	Amborella trichopoda	1e-10	59.7	143	33.57
gsu40020	Galdieria sulphuraria	2e-10	58.9	96	32.29
HE0000G54400	Helicosporidium sp.	2e-10	58.2	88	36.36
CNC64A_006G01270	Chlorella sp NC64A	3e-10	59.7	133	31.58
CNC64A_016G00930	Chlorella sp NC64A	1e-09	57.0	125	29.60
AC00G71800	Asterochloris sp. Cgr-DA1pho v2.0	5e-09	56.2	140	30.71
CV00G11240	Coccomyxa subellipsoidea C-169	6e-09	56.2	133	29.32
CR13G07240	Chlamydomonas reinhardtii	6e-09	55.8	122	29.51
CR13G02680	Chlamydomonas reinhardtii	8e-09	55.1	104	34.62
PP00083G00810	Physcomitrella patens	8e-09	55.5	131	31.30
OS09G36040	Oryza sativa	1e-08	54.3	124	30.65
VC00G132430	Volvox carteri	2e-08	54.7	122	29.51
RCC4223.181g00020	Picochlorum_RCC4223	3e-08	52.0	87	32.18
AP00G53730	Auxenochlorella protothecoides	4e-08	53.5	151	27.81
ENSMUSG00000103711	Mus musculus	8e-08	50.8	109	30.28
PI00G64980	Picochlorum sp. SENEW3 (SE3)	1e-07	52.0	104	33.65
MP07G04340	Micromonas pusilla strain CCMP1545	1e-07	50.8	80	33.75
AP00G25030	Auxenochlorella protothecoides	2e-07	51.2	124	29.84
AP00G56830	Auxenochlorella protothecoides	2e-07	52.4	91	31.87
RCC4223.05g00340	Picochlorum_RCC4223	3e-07	51.2	138	29.71
AP00G05940	Auxenochlorella protothecoides	3e-07	50.1	140	30.00
AC00G64880	Asterochloris sp. Cgr-DA1pho v2.0	3e-07	50.4	104	30.77
CR01G00870	Chlamydomonas reinhardtii	3e-07	52.0	78	34.62
HE0000G58420	Helicosporidium sp.	4e-07	50.8	90	34.44
VC00G133230	Volvox carteri	4e-07	49.3	90	35.56
RCC4223.02g10340	Picochlorum_RCC4223	6e-07	50.1	104	34.62
SPAC4H3.07c	Schizosaccharomyces pombe	1e-06	48.1	91	32.97
CV00G30790	Coccomyxa subellipsoidea C-169	1e-06	48.1	121	23.97
OS02G38240	Oryza sativa	1e-06	49.3	133	24.81
PI00G33100	Picochlorum sp. SENEW3 (SE3)	2e-06	49.3	142	28.87
OM_12G01280	Ostreococcus mediterraneus	3e-06	46.2	82	30.49
CNC64A_018G00060	Chlorella sp NC64A	7e-06	48.1	103	33.98
PP00292G00120	Physcomitrella patens	9e-06	47.4	108	29.63

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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