Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G12560	Arabidopsis thaliana	0.0	1275	620	100.00
AT5G13820	Arabidopsis thaliana	0.0	595	646	55.88
AT1G07540	Arabidopsis thaliana	4e-110	351	641	40.09
AT3G46590	Arabidopsis thaliana	1e-104	334	620	41.29
OS03G16700	Oryza sativa	4e-96	316	396	48.99
ATR_00012G02050	Amborella trichopoda	1e-90	298	427	45.67
AT5G59430	Arabidopsis thaliana	2e-88	292	595	40.50
ATR_00009G00500	Amborella trichopoda	7e-80	273	306	51.31
OS02G57270	Oryza sativa	1e-75	259	284	50.35
AT3G53790	Arabidopsis thaliana	1e-56	201	286	42.31
PP00098G00050	Physcomitrella patens	5e-48	172	111	71.17
PP00132G00360	Physcomitrella patens	3e-46	171	112	70.54
AC00G69690	Asterochloris sp. Cgr-DA1pho v2.0	3e-12	70.9	83	43.37
AC00G69700	Asterochloris sp. Cgr-DA1pho v2.0	4e-12	70.9	83	43.37
CV00G45040	Coccomyxa subellipsoidea C-169	5e-11	69.3	84	45.24
OL03G00840	Ostreococcus lucimarinus	7e-11	68.9	93	39.78
OM_09G00940	Ostreococcus mediterraneus	1e-10	68.2	93	39.78
ORCC809_03G02170	Ostreococcus sp RCC809	1e-10	68.2	78	43.59
MRCC299_16G00250	Micromonas sp RCC299	2e-10	65.9	73	45.21
OT_03G00850	Ostreococcus tauri	3e-10	66.6	84	40.48
BPRRCC1105_05G04430	Bathycoccus prasinos	6e-10	66.6	82	39.02
MRCC299_01G02000	Micromonas sp RCC299	7e-10	65.9	84	41.67
PP00165G00360	Physcomitrella patens	1e-09	65.5	121	34.71
BPRRCC1105_06G02260	Bathycoccus prasinos	1e-09	65.5	82	36.59
OL14G00690	Ostreococcus lucimarinus	2e-09	64.7	93	38.71
PP00043G00700	Physcomitrella patens	2e-09	65.1	121	34.71
MP09G05040	Micromonas pusilla strain CCMP1545	6e-09	62.8	97	38.14
OM_14G02390	Ostreococcus mediterraneus	7e-09	62.8	74	41.89
MP02G04990	Micromonas pusilla strain CCMP1545	2e-08	61.6	131	30.53
OT_15G00740	Ostreococcus tauri	2e-08	61.2	105	40.95
AT2G37025	Arabidopsis thaliana	4e-08	60.1	95	31.58
AT1G17460	Arabidopsis thaliana	5e-08	60.1	58	43.10
ORCC809_14G01100	Ostreococcus sp RCC809	9e-08	58.9	82	42.68
ATR_00024G02000	Amborella trichopoda	3e-07	57.8	96	34.38
AT1G72650	Arabidopsis thaliana	3e-07	57.4	86	32.56
BPRRCC1105_02G02440	Bathycoccus prasinos	4e-07	57.0	85	35.29
OS02G53670	Oryza sativa	1e-06	55.5	105	30.48
ATR_00009G00470	Amborella trichopoda	3e-06	54.3	89	34.83
ES0019G00330	Ectocarpus siliculosus	4e-06	53.9	106	37.74

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment