Functional clusters

Information

  • Type Gene Ontology
  • Description organic hydroxy compound metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cucumis melo chr07 3 CH_cme_265 7 38 0.000661463
Malus domestica Chr03 3 CH_mdo_684 7 35 0.000707332
Medicago truncatula chr3 3 CH_mtr_741 5 14 0.000748696
Cucumis melo chr07 4 CH_cme_265 7 38 0.000661463
Malus domestica Chr03 4 CH_mdo_684 7 35 0.000707332
Medicago truncatula chr3 4 CH_mtr_741 5 14 0.000748696

Available child term results

Ontology identifier Description Number of clusters
GO:0006020 inositol metabolic process 2
GO:0006060 sorbitol metabolic process 26
GO:0006066 alcohol metabolic process 6
GO:0006102 isocitrate metabolic process 2
GO:0006580 ethanolamine metabolic process 2
GO:0006671 phytosphingosine metabolic process 4
GO:0006729 tetrahydrobiopterin biosynthetic process 4
GO:0009697 salicylic acid biosynthetic process 28
GO:0010023 proanthocyanidin biosynthetic process 12
GO:0010115 regulation of abscisic acid biosynthetic process 12
GO:0010116 positive regulation of abscisic acid biosynthetic process 6
GO:0010337 regulation of salicylic acid metabolic process 16
GO:0010422 regulation of brassinosteroid biosynthetic process 44
GO:0016093 polyprenol metabolic process 4
GO:0016094 polyprenol biosynthetic process 4
GO:0016126 sterol biosynthetic process 4
GO:0016127 sterol catabolic process 10
GO:0016131 brassinosteroid metabolic process 2
GO:0018958 phenol-containing compound metabolic process 2
GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione 6
GO:0019310 inositol catabolic process 56
GO:0019408 dolichol biosynthetic process 18
GO:0019563 glycerol catabolic process 2
GO:0019632 shikimate metabolic process 6
GO:0033306 phytol metabolic process 74
GO:0033511 luteolin biosynthetic process 8
GO:0034308 primary alcohol metabolic process 4
GO:0046165 alcohol biosynthetic process 2
GO:0046189 phenol-containing compound biosynthetic process 2
GO:0046244 salicylic acid catabolic process 42
GO:0046345 abscisic acid catabolic process 16
GO:0046512 sphingosine biosynthetic process 16
GO:0046855 inositol phosphate dephosphorylation 4
GO:0051555 flavonol biosynthetic process 4
GO:0052746 inositol phosphorylation 10
GO:0080142 regulation of salicylic acid biosynthetic process 10
GO:0090359 negative regulation of abscisic acid biosynthetic process 4
GO:0090431 alkyl caffeate ester biosynthetic process 6
GO:0106118 regulation of sterol biosynthetic process 4
GO:1900088 regulation of inositol biosynthetic process 4
GO:1900384 regulation of flavonol biosynthetic process 4
GO:1900386 positive regulation of flavonol biosynthetic process 4
GO:1901599 (-)-pinoresinol biosynthetic process 70
GO:1901616 organic hydroxy compound catabolic process 28
GO:1901617 organic hydroxy compound biosynthetic process 4
GO:1901695 tyramine biosynthetic process 20
GO:1902609 (R)-2-hydroxy-alpha-linolenic acid biosynthetic process 2
GO:1904964 positive regulation of phytol biosynthetic process 12
GO:2000029 regulation of proanthocyanidin biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001