Functional clusters

Information

  • Type Gene Ontology
  • Description salicylic acid biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr10 3 CH_camsi_541 3 7 0.0000617586
Daucus carota DCARv2_Chr2 3 CH_dca_129 4 9 0.000000299511
Daucus carota DCARv2_Chr7 3 CH_dca_177 3 3 0.00000497887
Eucalyptus grandis Chr06 3 CH_egr_162 6 8 7.42344e-16
Helianthus annuus HanXRQChr04 3 CH_han_434 3 5 0.0000297746
Lotus japonicus chr3 3 CH_lja_141 3 3 0.00000168747
Lactuca sativa Lsat_1_v8_lg_6 3 CH_lsa_118 4 4 0.000000000741536
Oryza sativa ssp. japonica chr08 3 CH_osa_211 3 5 0.00000351338
Populus trichocarpa Chr03 3 CH_ptr_238 3 3 0.00000110251
Quercus lobata 7 3 CH_qlo_313 4 5 0.00000000206603
Quercus lobata 11 3 CH_qlo_593 3 4 0.0000058203
Rhododendron simsii chr09 3 CH_rsi_270 3 4 0.00000299772
Sequoiadendron giganteum chr7 3 CH_sgi_390 5 7 0.000000000150571
Trifolium pratense Tp57577_TGAC_v2_LG3 3 CH_tpr_22 5 5 0.000000000000195078
Camellia sinensis var. sinensis Chr10 4 CH_camsi_541 3 7 0.0000617586
Daucus carota DCARv2_Chr2 4 CH_dca_129 4 9 0.000000299511
Daucus carota DCARv2_Chr7 4 CH_dca_177 3 3 0.00000497887
Eucalyptus grandis Chr06 4 CH_egr_162 6 8 7.42344e-16
Helianthus annuus HanXRQChr04 4 CH_han_434 3 5 0.0000297746
Lotus japonicus chr3 4 CH_lja_141 3 3 0.00000168747
Lactuca sativa Lsat_1_v8_lg_6 4 CH_lsa_118 4 4 0.000000000741536
Oryza sativa ssp. japonica chr08 4 CH_osa_211 3 5 0.00000351338
Populus trichocarpa Chr03 4 CH_ptr_238 3 3 0.00000110251
Quercus lobata 7 4 CH_qlo_313 4 5 0.00000000206603
Quercus lobata 11 4 CH_qlo_593 3 4 0.0000058203
Rhododendron simsii chr09 4 CH_rsi_270 3 4 0.00000299772
Sequoiadendron giganteum chr7 4 CH_sgi_390 5 7 0.000000000150571
Trifolium pratense Tp57577_TGAC_v2_LG3 4 CH_tpr_22 5 5 0.000000000000195078

Available child term results

Ontology identifier Description Number of clusters
GO:0080142 regulation of salicylic acid biosynthetic process 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001