Functional clusters
Information
- Type Gene Ontology
- Description regulation of brassinosteroid biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group7 | 3 | CH_ach_203 | 2 | 2 | 0.000325928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 3 | CH_arhy_46 | 7 | 9 | 3.50309e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00174 | 3 | CH_atr_317 | 2 | 3 | 0.000714919 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_122 | 3 | 5 | 0.000000344111 |
| Carya illinoinensis | Chr06 | 3 | CH_cil_169 | 3 | 3 | 0.0000000230519 |
| Carica papaya | supercontig_26 | 3 | CH_cpa_5 | 6 | 7 | 8.56396e-18 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_107 | 3 | 3 | 0.0000000610156 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_96 | 3 | 3 | 0.0000000375197 |
| Durio zibethinus | NW_019168270.1 | 3 | CH_dzi_175 | 3 | 13 | 0.00000921073 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_47 | 9 | 12 | 9.45061e-27 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_229 | 3 | 15 | 0.0000144638 |
| Glycine max | Gm18 | 3 | CH_gma_436 | 2 | 2 | 0.000379557 |
| Glycine max | Gm09 | 3 | CH_gma_437 | 2 | 2 | 0.000379557 |
| Lupinus albus | Lalb_Chr11 | 3 | CH_lal_113 | 4 | 21 | 0.0000000907132 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 3 | CH_lsa_48 | 5 | 5 | 0.00000000000000109957 |
| Petunia axillaris | Peaxi162Scf00238 | 3 | CH_pax_240 | 2 | 3 | 0.00021106 |
| Papaver somniferum | NC_039361.1 | 3 | CH_pso_544 | 2 | 3 | 0.000202761 |
| Populus trichocarpa | Chr02 | 3 | CH_ptr_63 | 5 | 6 | 0.0000000000000105485 |
| Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_212 | 3 | 5 | 0.000000620942 |
| Salix brachista | GWHAAZH00000010 | 3 | CH_sbr_120 | 3 | 3 | 0.0000000595633 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_205 | 3 | 5 | 0.000000157555 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_350 | 2 | 3 | 0.000681233 |
| Actinidia chinensis | Lachesis_group7 | 4 | CH_ach_203 | 2 | 2 | 0.000325928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 4 | CH_arhy_46 | 7 | 9 | 3.50309e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00174 | 4 | CH_atr_317 | 2 | 3 | 0.000714919 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_122 | 3 | 5 | 0.000000344111 |
| Carya illinoinensis | Chr06 | 4 | CH_cil_169 | 3 | 3 | 0.0000000230519 |
| Carica papaya | supercontig_26 | 4 | CH_cpa_5 | 6 | 7 | 8.56396e-18 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_107 | 3 | 3 | 0.0000000610156 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_96 | 3 | 3 | 0.0000000375197 |
| Durio zibethinus | NW_019168270.1 | 4 | CH_dzi_175 | 3 | 13 | 0.00000921073 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_47 | 9 | 12 | 9.45061e-27 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_229 | 3 | 15 | 0.0000144638 |
| Glycine max | Gm18 | 4 | CH_gma_436 | 2 | 2 | 0.000379557 |
| Glycine max | Gm09 | 4 | CH_gma_437 | 2 | 2 | 0.000379557 |
| Lupinus albus | Lalb_Chr11 | 4 | CH_lal_113 | 4 | 21 | 0.0000000907132 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 4 | CH_lsa_48 | 5 | 5 | 0.00000000000000109957 |
| Petunia axillaris | Peaxi162Scf00238 | 4 | CH_pax_240 | 2 | 3 | 0.00021106 |
| Papaver somniferum | NC_039361.1 | 4 | CH_pso_544 | 2 | 3 | 0.000202761 |
| Populus trichocarpa | Chr02 | 4 | CH_ptr_63 | 5 | 6 | 0.0000000000000105485 |
| Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_212 | 3 | 5 | 0.000000620942 |
| Salix brachista | GWHAAZH00000010 | 4 | CH_sbr_120 | 3 | 3 | 0.0000000595633 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_205 | 3 | 5 | 0.000000157555 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_350 | 2 | 3 | 0.000681233 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |