Functional clusters
Information
- Type Gene Ontology
- Description regulation of salicylic acid metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 3 | CH_atr_7 | 12 | 38 | 3.22901e-25 |
| Camellia sinensis var. sinensis | Chr6 | 3 | CH_camsi_548 | 3 | 9 | 0.0000756845 |
| Coffea canephora | chr5 | 3 | CH_ccan_71 | 4 | 50 | 0.0000000381301 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_315 | 4 | 4 | 0.000000000430075 |
| Erythranthe guttata | scaffold_2 | 3 | CH_egut_33 | 7 | 9 | 1.34438e-17 |
| Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_180 | 5 | 16 | 0.00000000259861 |
| Marchantia polymorpha | scaffold_185 | 3 | CH_mpo_23 | 5 | 10 | 0.000000000561813 |
| Pisum sativum | chr3LG5 | 3 | CH_psa_130 | 3 | 3 | 0.00000116735 |
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 4 | CH_atr_7 | 12 | 38 | 3.22901e-25 |
| Camellia sinensis var. sinensis | Chr6 | 4 | CH_camsi_548 | 3 | 9 | 0.0000756845 |
| Coffea canephora | chr5 | 4 | CH_ccan_71 | 4 | 50 | 0.0000000381301 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_315 | 4 | 4 | 0.000000000430075 |
| Erythranthe guttata | scaffold_2 | 4 | CH_egut_33 | 7 | 9 | 1.34438e-17 |
| Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_180 | 5 | 16 | 0.00000000259861 |
| Marchantia polymorpha | scaffold_185 | 4 | CH_mpo_23 | 5 | 10 | 0.000000000561813 |
| Pisum sativum | chr3LG5 | 4 | CH_psa_130 | 3 | 3 | 0.00000116735 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0080142 | regulation of salicylic acid biosynthetic process | 10 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |