Functional clusters

Information

  • Type Gene Ontology
  • Description cell periphery

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 3 CH_aag_167 14 42 0.000521269
Arabidopsis thaliana Chr4 3 CH_ath_103 28 78 0.00000000387321
Arabidopsis thaliana Chr4 3 CH_ath_199 25 76 0.000000796512
Arabidopsis thaliana Chr4 3 CH_ath_88 29 80 0.00000000102807
Magnolia biondii Chr07 3 CH_mbi_650 7 8 0.000814904
Solanum pennellii Spenn-ch01 3 CH_spe_126 22 62 0.000000034345
Solanum pennellii Spenn-ch12 3 CH_spe_428 19 73 0.000467875
Anthoceros agrestis Sc2ySwM_344 4 CH_aag_167 14 42 0.000521269
Arabidopsis thaliana Chr4 4 CH_ath_103 28 78 0.00000000387321
Arabidopsis thaliana Chr4 4 CH_ath_199 25 76 0.000000796512
Arabidopsis thaliana Chr4 4 CH_ath_88 29 80 0.00000000102807
Magnolia biondii Chr07 4 CH_mbi_650 7 8 0.000814904
Solanum pennellii Spenn-ch01 4 CH_spe_126 22 62 0.000000034345
Solanum pennellii Spenn-ch12 4 CH_spe_428 19 73 0.000467875

Available child term results

Ontology identifier Description Number of clusters
GO:0000145 exocyst 110
GO:0005618 cell wall 14
GO:0005886 plasma membrane 36
GO:0005887 integral component of plasma membrane 2
GO:0005901 caveola 8
GO:0009505 plant-type cell wall 18
GO:0009511 plasmodesmatal endoplasmic reticulum 6
GO:0009897 external side of plasma membrane 2
GO:0009921 auxin efflux carrier complex 6
GO:0009925 basal plasma membrane 4
GO:0016324 apical plasma membrane 2
GO:0016328 lateral plasma membrane 2
GO:0019897 extrinsic component of plasma membrane 32
GO:0030122 AP-2 adaptor complex 6
GO:0030132 clathrin coat of coated pit 8
GO:0031012 extracellular matrix 132
GO:0031234 extrinsic component of cytoplasmic side of plasma membrane 4
GO:0032541 cortical endoplasmic reticulum 2
GO:0043190 ATP-binding cassette (ABC) transporter complex 8
GO:0043668 exine 64
GO:0043674 columella 2
GO:0043680 filiform apparatus 18
GO:0044853 plasma membrane raft 16
GO:0046658 anchored component of plasma membrane 22
GO:0048226 Casparian strip 10
GO:0055028 cortical microtubule 2
GO:0062074 pollen aperture 12
GO:0070505 pollen coat 6
GO:0097218 sieve plate 2
GO:0099738 cell cortex region 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001