Functional clusters
Information
- Type Gene Ontology
- Description Casparian strip
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_171 | 3 | 3 | 0.0000024646 |
| Petunia axillaris | Peaxi162Scf01149 | 3 | CH_pax_154 | 3 | 4 | 0.000016626 |
| Populus trichocarpa | Chr15 | 3 | CH_ptr_288 | 3 | 4 | 0.0000308568 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_166 | 7 | 10 | 1.96912e-16 |
| Solanum pennellii | Spenn-ch06 | 3 | CH_spe_197 | 3 | 3 | 0.00000287565 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_171 | 3 | 3 | 0.0000024646 |
| Petunia axillaris | Peaxi162Scf01149 | 4 | CH_pax_154 | 3 | 4 | 0.000016626 |
| Populus trichocarpa | Chr15 | 4 | CH_ptr_288 | 3 | 4 | 0.0000308568 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_166 | 7 | 10 | 1.96912e-16 |
| Solanum pennellii | Spenn-ch06 | 4 | CH_spe_197 | 3 | 3 | 0.00000287565 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |