Functional clusters

Information

  • Type Gene Ontology
  • Description anchored component of plasma membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 3 CH_arhy_654 5 76 0.000578473
Brassica carinata ChrC03 3 CH_bca_651 3 4 0.000156617
Brassica napus A02 3 CH_bna_246 4 7 0.00000111527
Chenopodium quinoa C_Quinoa_Scaffold_1373 3 CH_cqu_142 4 4 0.000000108848
Magnolia biondii Chr18 3 CH_mbi_207 4 5 0.00000015693
Malus domestica Chr03 3 CH_mdo_391 3 3 0.0000349768
Papaver somniferum NC_039358.1 3 CH_pso_243 4 4 0.000000118868
Papaver somniferum NW_020624820.1 3 CH_pso_531 5 45 0.000146915
Rhododendron simsii chr04 3 CH_rsi_333 4 16 0.0000522898
Solanum tuberosum ST4.03ch07 3 CH_stu_252 5 9 0.000000885273
Zea mays 3 3 CH_zma_280 4 6 0.000443282
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 4 CH_arhy_654 5 76 0.000578473
Brassica carinata ChrC03 4 CH_bca_651 3 4 0.000156617
Brassica napus A02 4 CH_bna_246 4 7 0.00000111527
Chenopodium quinoa C_Quinoa_Scaffold_1373 4 CH_cqu_142 4 4 0.000000108848
Magnolia biondii Chr18 4 CH_mbi_207 4 5 0.00000015693
Malus domestica Chr03 4 CH_mdo_391 3 3 0.0000349768
Papaver somniferum NC_039358.1 4 CH_pso_243 4 4 0.000000118868
Papaver somniferum NW_020624820.1 4 CH_pso_531 5 45 0.000146915
Rhododendron simsii chr04 4 CH_rsi_333 4 16 0.0000522898
Solanum tuberosum ST4.03ch07 4 CH_stu_252 5 9 0.000000885273
Zea mays 3 4 CH_zma_280 4 6 0.000443282

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001