Functional clusters

Information

  • Type Gene Ontology
  • Description cell wall

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 3 CH_ath_457 9 46 0.00016073
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_232 8 27 0.0000277047
Eucalyptus grandis Chr07 3 CH_egr_215 20 70 0.000000000000314788
Eucalyptus grandis Chr01 3 CH_egr_466 13 47 0.000000277101
Lupinus albus Lalb_Chr11 3 CH_lal_158 17 80 0.00000179712
Selenicereus undatus Scaffold_10417 3 CH_sun_73 6 8 0.000015801
Theobroma cacao Chromosome_8 3 CH_tca_311 5 6 0.000185764
Arabidopsis thaliana Chr1 4 CH_ath_457 9 46 0.00016073
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_232 8 27 0.0000277047
Eucalyptus grandis Chr07 4 CH_egr_215 20 70 0.000000000000314788
Eucalyptus grandis Chr01 4 CH_egr_466 13 47 0.000000277101
Lupinus albus Lalb_Chr11 4 CH_lal_158 17 80 0.00000179712
Selenicereus undatus Scaffold_10417 4 CH_sun_73 6 8 0.000015801
Theobroma cacao Chromosome_8 4 CH_tca_311 5 6 0.000185764

Available child term results

Ontology identifier Description Number of clusters
GO:0009505 plant-type cell wall 18
GO:0043680 filiform apparatus 18
GO:0048226 Casparian strip 10
GO:0097218 sieve plate 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001