Functional clusters
Information
- Type Gene Ontology
- Description plant-type cell wall
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrB01 | 3 | CH_bca_615 | 4 | 6 | 0.000122796 |
Camellia sinensis var. sinensis | Chr9 | 3 | CH_camsi_157 | 7 | 10 | 0.00000000184132 |
Chenopodium quinoa | C_Quinoa_Scaffold_3674 | 3 | CH_cqu_352 | 4 | 4 | 0.0000895922 |
Erigeron canadensis | Conyza_canadensis_scaffold:3 | 3 | CH_eca_344 | 4 | 6 | 0.000216985 |
Lactuca sativa | Lsat_1_v8_lg_9 | 3 | CH_lsa_60 | 10 | 20 | 0.000000000000147096 |
Papaver somniferum | NC_039360.1 | 3 | CH_pso_223 | 6 | 8 | 0.0000000358042 |
Papaver somniferum | NW_020651082.1 | 3 | CH_pso_323 | 5 | 6 | 0.00000156885 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_467 | 5 | 12 | 0.000027241 |
Trochodendron aralioides | group14 | 3 | CH_tar_109 | 6 | 7 | 0.0000000336447 |
Brassica carinata | ChrB01 | 4 | CH_bca_615 | 4 | 6 | 0.000122796 |
Camellia sinensis var. sinensis | Chr9 | 4 | CH_camsi_157 | 7 | 10 | 0.00000000184132 |
Chenopodium quinoa | C_Quinoa_Scaffold_3674 | 4 | CH_cqu_352 | 4 | 4 | 0.0000895922 |
Erigeron canadensis | Conyza_canadensis_scaffold:3 | 4 | CH_eca_344 | 4 | 6 | 0.000216985 |
Lactuca sativa | Lsat_1_v8_lg_9 | 4 | CH_lsa_60 | 10 | 20 | 0.000000000000147096 |
Papaver somniferum | NC_039360.1 | 4 | CH_pso_223 | 6 | 8 | 0.0000000358042 |
Papaver somniferum | NW_020651082.1 | 4 | CH_pso_323 | 5 | 6 | 0.00000156885 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_467 | 5 | 12 | 0.000027241 |
Trochodendron aralioides | group14 | 4 | CH_tar_109 | 6 | 7 | 0.0000000336447 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0048226 | Casparian strip | 10 |
GO:0097218 | sieve plate | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |