Functional clusters

Information

  • Type Gene Ontology
  • Description plant-type cell wall

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 3 CH_bca_615 4 6 0.000122796
Camellia sinensis var. sinensis Chr9 3 CH_camsi_157 7 10 0.00000000184132
Chenopodium quinoa C_Quinoa_Scaffold_3674 3 CH_cqu_352 4 4 0.0000895922
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_344 4 6 0.000216985
Lactuca sativa Lsat_1_v8_lg_9 3 CH_lsa_60 10 20 0.000000000000147096
Papaver somniferum NC_039360.1 3 CH_pso_223 6 8 0.0000000358042
Papaver somniferum NW_020651082.1 3 CH_pso_323 5 6 0.00000156885
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_467 5 12 0.000027241
Trochodendron aralioides group14 3 CH_tar_109 6 7 0.0000000336447
Brassica carinata ChrB01 4 CH_bca_615 4 6 0.000122796
Camellia sinensis var. sinensis Chr9 4 CH_camsi_157 7 10 0.00000000184132
Chenopodium quinoa C_Quinoa_Scaffold_3674 4 CH_cqu_352 4 4 0.0000895922
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_344 4 6 0.000216985
Lactuca sativa Lsat_1_v8_lg_9 4 CH_lsa_60 10 20 0.000000000000147096
Papaver somniferum NC_039360.1 4 CH_pso_223 6 8 0.0000000358042
Papaver somniferum NW_020651082.1 4 CH_pso_323 5 6 0.00000156885
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_467 5 12 0.000027241
Trochodendron aralioides group14 4 CH_tar_109 6 7 0.0000000336447

Available child term results

Ontology identifier Description Number of clusters
GO:0048226 Casparian strip 10
GO:0097218 sieve plate 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001