Functional clusters
Information
- Type Gene Ontology
- Description extracellular matrix
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr11 | 3 | CH_acertr_273 | 3 | 3 | 0.0000446107 |
Acer truncatum | chr12 | 3 | CH_acertr_53 | 5 | 5 | 0.0000000000515561 |
Actinidia chinensis | Lachesis_group3 | 3 | CH_ach_12 | 6 | 7 | 0.0000000000000353765 |
Aquilegia oxysepala | CHR03 | 3 | CH_aox_37 | 5 | 9 | 0.000000000793878 |
Aquilegia oxysepala | CHR03 | 3 | CH_aox_50 | 4 | 4 | 0.00000000926281 |
Corylus avellana | 9 | 3 | CH_cav_100 | 4 | 5 | 0.0000000494273 |
Carpinus fangiana | Cfa06 | 3 | CH_cfa_9 | 10 | 13 | 4.98801e-24 |
Carpinus fangiana | Cfa01 | 3 | CH_cfa_97 | 4 | 5 | 0.0000000357177 |
Carya illinoinensis | Chr02 | 3 | CH_cil_36 | 8 | 8 | 3.35249e-20 |
Citrullus lanatus | CG_Chr09 | 3 | CH_cla_84 | 3 | 3 | 0.0000134578 |
Cucumis melo | chr09 | 3 | CH_cme_2 | 12 | 19 | 1.32365e-29 |
Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 3 | CH_cqu_328 | 3 | 4 | 0.0000441094 |
Cucumis sativus L. | chr5 | 3 | CH_csa_2 | 14 | 15 | 1.18626e-37 |
Daucus carota | DCARv2_Chr9 | 3 | CH_dca_110 | 4 | 5 | 0.0000000682566 |
Daucus carota | DCARv2_Chr2 | 3 | CH_dca_257 | 3 | 4 | 0.000071345 |
Davidia involucrata | GWHABJS00000012 | 3 | CH_din_84 | 4 | 4 | 0.00000000658668 |
Durio zibethinus | NW_019168470.1 | 3 | CH_dzi_217 | 3 | 4 | 0.0000638987 |
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 3 | CH_eca_23 | 6 | 11 | 0.000000000000334338 |
Erythranthe guttata | scaffold_11 | 3 | CH_egut_100 | 5 | 5 | 0.000000000666904 |
Erythranthe guttata | scaffold_4 | 3 | CH_egut_173 | 4 | 4 | 0.000000366317 |
Erythranthe guttata | scaffold_12 | 3 | CH_egut_174 | 4 | 4 | 0.000000366317 |
Erythranthe guttata | scaffold_4 | 3 | CH_egut_215 | 4 | 6 | 0.00000547836 |
Fragaria vesca | Fvb6 | 3 | CH_fve_115 | 4 | 5 | 0.0000000224242 |
Glycine max | Gm01 | 3 | CH_gma_352 | 3 | 4 | 0.000169305 |
Glycine max | Gm02 | 3 | CH_gma_7 | 12 | 16 | 1.21509e-29 |
Gossypium raimondii | Chr08 | 3 | CH_gra_182 | 3 | 3 | 0.0000126105 |
Helianthus annuus | HanXRQChr13 | 3 | CH_han_347 | 5 | 30 | 0.00000225845 |
Helianthus annuus | HanXRQChr09 | 3 | CH_han_379 | 5 | 37 | 0.00000687769 |
Hydrangea macrophylla | Hma1.2p1_0112F.1 | 3 | CH_hma_60 | 4 | 4 | 0.000000112721 |
Lotus japonicus | chr2 | 3 | CH_lja_8 | 9 | 9 | 1.38783e-23 |
Lonicera japonica | GWHAAZE00000094 | 3 | CH_lonja_83 | 6 | 6 | 0.00000000000000513212 |
Lactuca sativa | Lsat_1_v8_lg_3 | 3 | CH_lsa_273 | 5 | 50 | 0.00000875798 |
Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_322 | 3 | 4 | 0.0000463462 |
Malus domestica | Chr09 | 3 | CH_mdo_331 | 3 | 3 | 0.00000875767 |
Manihot esculenta | Chromosome15 | 3 | CH_mes_116 | 6 | 12 | 0.00000000016431 |
Manihot esculenta | Chromosome07 | 3 | CH_mes_163 | 4 | 4 | 0.000000111475 |
Manihot esculenta | Chromosome17 | 3 | CH_mes_91 | 6 | 8 | 0.00000000000500062 |
Marchantia polymorpha | scaffold_40 | 3 | CH_mpo_130 | 3 | 13 | 0.000860116 |
Medicago truncatula | chr5 | 3 | CH_mtr_20 | 11 | 23 | 2.49115e-26 |
Nelumbo nucifera | chr3 | 3 | CH_nnu_63 | 4 | 4 | 0.00000000796381 |
Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_77 | 5 | 8 | 0.000000000149391 |
Prunus persica | Pp03 | 3 | CH_ppe_21 | 9 | 9 | 4.76658e-22 |
Pisum sativum | chr2LG1 | 3 | CH_psa_136 | 4 | 13 | 0.00000147044 |
Papaver somniferum | NW_020620381.1 | 3 | CH_pso_500 | 3 | 4 | 0.000132955 |
Populus trichocarpa | Chr08 | 3 | CH_ptr_123 | 5 | 6 | 0.000000000251941 |
Phaseolus vulgaris | Chr02 | 3 | CH_pvu_93 | 4 | 4 | 0.00000000870485 |
Quercus lobata | CM012294 | 3 | CH_qlo_503 | 5 | 17 | 0.000000765331 |
Quercus lobata | 6 | 3 | CH_qlo_61 | 10 | 13 | 6.73694e-23 |
Quercus lobata | 10 | 3 | CH_qlo_763 | 3 | 3 | 0.000083267 |
Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_204 | 5 | 11 | 0.00000000328906 |
Rhododendron simsii | chr08 | 3 | CH_rsi_1 | 30 | 35 | 5.81895e-76 |
Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_69 | 6 | 7 | 0.0000000000000713592 |
Salix brachista | GWHAAZH00000008 | 3 | CH_sbr_102 | 4 | 4 | 0.0000000112231 |
Salix brachista | GWHAAZH00000019 | 3 | CH_sbr_204 | 3 | 3 | 0.0000154864 |
Sechium edule | LG03 | 3 | CH_sed_153 | 3 | 3 | 0.0000343183 |
Sechium edule | LG11 | 3 | CH_sed_30 | 6 | 6 | 0.0000000000000306271 |
Sequoiadendron giganteum | chr5 | 3 | CH_sgi_128 | 13 | 67 | 1.06205e-19 |
Solanum tuberosum | ST4.03ch05 | 3 | CH_stu_436 | 3 | 6 | 0.000139355 |
Trochodendron aralioides | group8 | 3 | CH_tar_14 | 8 | 10 | 1.20478e-18 |
Trochodendron aralioides | group13 | 3 | CH_tar_251 | 3 | 3 | 0.0000386042 |
Theobroma cacao | Chromosome_10 | 3 | CH_tca_122 | 4 | 4 | 0.0000000149101 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_227 | 3 | CH_tpr_174 | 3 | 4 | 0.0000233695 |
Tripterygium wilfordii | NC_052242.1 | 3 | CH_twi_10 | 12 | 32 | 3.69539e-22 |
Tripterygium wilfordii | NC_052248.1 | 3 | CH_twi_78 | 6 | 19 | 0.00000000941794 |
Vigna mungo | CM024074.1 | 3 | CH_vmu_94 | 4 | 7 | 0.000000250449 |
Vitis vinifera | chr14 | 3 | CH_vvi_73 | 5 | 5 | 0.00000000000389312 |
Acer truncatum | chr11 | 4 | CH_acertr_273 | 3 | 3 | 0.0000446107 |
Acer truncatum | chr12 | 4 | CH_acertr_53 | 5 | 5 | 0.0000000000515561 |
Actinidia chinensis | Lachesis_group3 | 4 | CH_ach_12 | 6 | 7 | 0.0000000000000353765 |
Aquilegia oxysepala | CHR03 | 4 | CH_aox_37 | 5 | 9 | 0.000000000793878 |
Aquilegia oxysepala | CHR03 | 4 | CH_aox_50 | 4 | 4 | 0.00000000926281 |
Corylus avellana | 9 | 4 | CH_cav_100 | 4 | 5 | 0.0000000494273 |
Carpinus fangiana | Cfa06 | 4 | CH_cfa_9 | 10 | 13 | 4.98801e-24 |
Carpinus fangiana | Cfa01 | 4 | CH_cfa_97 | 4 | 5 | 0.0000000357177 |
Carya illinoinensis | Chr02 | 4 | CH_cil_36 | 8 | 8 | 3.35249e-20 |
Citrullus lanatus | CG_Chr09 | 4 | CH_cla_84 | 3 | 3 | 0.0000134578 |
Cucumis melo | chr09 | 4 | CH_cme_2 | 12 | 19 | 1.32365e-29 |
Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 4 | CH_cqu_328 | 3 | 4 | 0.0000441094 |
Cucumis sativus L. | chr5 | 4 | CH_csa_2 | 14 | 15 | 1.18626e-37 |
Daucus carota | DCARv2_Chr9 | 4 | CH_dca_110 | 4 | 5 | 0.0000000682566 |
Daucus carota | DCARv2_Chr2 | 4 | CH_dca_257 | 3 | 4 | 0.000071345 |
Davidia involucrata | GWHABJS00000012 | 4 | CH_din_84 | 4 | 4 | 0.00000000658668 |
Durio zibethinus | NW_019168470.1 | 4 | CH_dzi_217 | 3 | 4 | 0.0000638987 |
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 4 | CH_eca_23 | 6 | 11 | 0.000000000000334338 |
Erythranthe guttata | scaffold_11 | 4 | CH_egut_100 | 5 | 5 | 0.000000000666904 |
Erythranthe guttata | scaffold_4 | 4 | CH_egut_173 | 4 | 4 | 0.000000366317 |
Erythranthe guttata | scaffold_12 | 4 | CH_egut_174 | 4 | 4 | 0.000000366317 |
Erythranthe guttata | scaffold_4 | 4 | CH_egut_215 | 4 | 6 | 0.00000547836 |
Fragaria vesca | Fvb6 | 4 | CH_fve_115 | 4 | 5 | 0.0000000224242 |
Glycine max | Gm01 | 4 | CH_gma_352 | 3 | 4 | 0.000169305 |
Glycine max | Gm02 | 4 | CH_gma_7 | 12 | 16 | 1.21509e-29 |
Gossypium raimondii | Chr08 | 4 | CH_gra_182 | 3 | 3 | 0.0000126105 |
Helianthus annuus | HanXRQChr13 | 4 | CH_han_347 | 5 | 30 | 0.00000225845 |
Helianthus annuus | HanXRQChr09 | 4 | CH_han_379 | 5 | 37 | 0.00000687769 |
Hydrangea macrophylla | Hma1.2p1_0112F.1 | 4 | CH_hma_60 | 4 | 4 | 0.000000112721 |
Lotus japonicus | chr2 | 4 | CH_lja_8 | 9 | 9 | 1.38783e-23 |
Lonicera japonica | GWHAAZE00000094 | 4 | CH_lonja_83 | 6 | 6 | 0.00000000000000513212 |
Lactuca sativa | Lsat_1_v8_lg_3 | 4 | CH_lsa_273 | 5 | 50 | 0.00000875798 |
Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_322 | 3 | 4 | 0.0000463462 |
Malus domestica | Chr09 | 4 | CH_mdo_331 | 3 | 3 | 0.00000875767 |
Manihot esculenta | Chromosome15 | 4 | CH_mes_116 | 6 | 12 | 0.00000000016431 |
Manihot esculenta | Chromosome07 | 4 | CH_mes_163 | 4 | 4 | 0.000000111475 |
Manihot esculenta | Chromosome17 | 4 | CH_mes_91 | 6 | 8 | 0.00000000000500062 |
Marchantia polymorpha | scaffold_40 | 4 | CH_mpo_130 | 3 | 13 | 0.000860116 |
Medicago truncatula | chr5 | 4 | CH_mtr_20 | 11 | 23 | 2.49115e-26 |
Nelumbo nucifera | chr3 | 4 | CH_nnu_63 | 4 | 4 | 0.00000000796381 |
Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_77 | 5 | 8 | 0.000000000149391 |
Prunus persica | Pp03 | 4 | CH_ppe_21 | 9 | 9 | 4.76658e-22 |
Pisum sativum | chr2LG1 | 4 | CH_psa_136 | 4 | 13 | 0.00000147044 |
Papaver somniferum | NW_020620381.1 | 4 | CH_pso_500 | 3 | 4 | 0.000132955 |
Populus trichocarpa | Chr08 | 4 | CH_ptr_123 | 5 | 6 | 0.000000000251941 |
Phaseolus vulgaris | Chr02 | 4 | CH_pvu_93 | 4 | 4 | 0.00000000870485 |
Quercus lobata | CM012294 | 4 | CH_qlo_503 | 5 | 17 | 0.000000765331 |
Quercus lobata | 6 | 4 | CH_qlo_61 | 10 | 13 | 6.73694e-23 |
Quercus lobata | 10 | 4 | CH_qlo_763 | 3 | 3 | 0.000083267 |
Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_204 | 5 | 11 | 0.00000000328906 |
Rhododendron simsii | chr08 | 4 | CH_rsi_1 | 30 | 35 | 5.81895e-76 |
Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_69 | 6 | 7 | 0.0000000000000713592 |
Salix brachista | GWHAAZH00000008 | 4 | CH_sbr_102 | 4 | 4 | 0.0000000112231 |
Salix brachista | GWHAAZH00000019 | 4 | CH_sbr_204 | 3 | 3 | 0.0000154864 |
Sechium edule | LG03 | 4 | CH_sed_153 | 3 | 3 | 0.0000343183 |
Sechium edule | LG11 | 4 | CH_sed_30 | 6 | 6 | 0.0000000000000306271 |
Sequoiadendron giganteum | chr5 | 4 | CH_sgi_128 | 13 | 67 | 1.06205e-19 |
Solanum tuberosum | ST4.03ch05 | 4 | CH_stu_436 | 3 | 6 | 0.000139355 |
Trochodendron aralioides | group8 | 4 | CH_tar_14 | 8 | 10 | 1.20478e-18 |
Trochodendron aralioides | group13 | 4 | CH_tar_251 | 3 | 3 | 0.0000386042 |
Theobroma cacao | Chromosome_10 | 4 | CH_tca_122 | 4 | 4 | 0.0000000149101 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_227 | 4 | CH_tpr_174 | 3 | 4 | 0.0000233695 |
Tripterygium wilfordii | NC_052242.1 | 4 | CH_twi_10 | 12 | 32 | 3.69539e-22 |
Tripterygium wilfordii | NC_052248.1 | 4 | CH_twi_78 | 6 | 19 | 0.00000000941794 |
Vigna mungo | CM024074.1 | 4 | CH_vmu_94 | 4 | 7 | 0.000000250449 |
Vitis vinifera | chr14 | 4 | CH_vvi_73 | 5 | 5 | 0.00000000000389312 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0070505 | pollen coat | 6 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |