Functional clusters

Information

  • Type Gene Ontology
  • Description extracellular matrix

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 3 CH_acertr_273 3 3 0.0000446107
Acer truncatum chr12 3 CH_acertr_53 5 5 0.0000000000515561
Actinidia chinensis Lachesis_group3 3 CH_ach_12 6 7 0.0000000000000353765
Aquilegia oxysepala CHR03 3 CH_aox_37 5 9 0.000000000793878
Aquilegia oxysepala CHR03 3 CH_aox_50 4 4 0.00000000926281
Corylus avellana 9 3 CH_cav_100 4 5 0.0000000494273
Carpinus fangiana Cfa06 3 CH_cfa_9 10 13 4.98801e-24
Carpinus fangiana Cfa01 3 CH_cfa_97 4 5 0.0000000357177
Carya illinoinensis Chr02 3 CH_cil_36 8 8 3.35249e-20
Citrullus lanatus CG_Chr09 3 CH_cla_84 3 3 0.0000134578
Cucumis melo chr09 3 CH_cme_2 12 19 1.32365e-29
Chenopodium quinoa C_Quinoa_Scaffold_4244 3 CH_cqu_328 3 4 0.0000441094
Cucumis sativus L. chr5 3 CH_csa_2 14 15 1.18626e-37
Daucus carota DCARv2_Chr9 3 CH_dca_110 4 5 0.0000000682566
Daucus carota DCARv2_Chr2 3 CH_dca_257 3 4 0.000071345
Davidia involucrata GWHABJS00000012 3 CH_din_84 4 4 0.00000000658668
Durio zibethinus NW_019168470.1 3 CH_dzi_217 3 4 0.0000638987
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_23 6 11 0.000000000000334338
Erythranthe guttata scaffold_11 3 CH_egut_100 5 5 0.000000000666904
Erythranthe guttata scaffold_4 3 CH_egut_173 4 4 0.000000366317
Erythranthe guttata scaffold_12 3 CH_egut_174 4 4 0.000000366317
Erythranthe guttata scaffold_4 3 CH_egut_215 4 6 0.00000547836
Fragaria vesca Fvb6 3 CH_fve_115 4 5 0.0000000224242
Glycine max Gm01 3 CH_gma_352 3 4 0.000169305
Glycine max Gm02 3 CH_gma_7 12 16 1.21509e-29
Gossypium raimondii Chr08 3 CH_gra_182 3 3 0.0000126105
Helianthus annuus HanXRQChr13 3 CH_han_347 5 30 0.00000225845
Helianthus annuus HanXRQChr09 3 CH_han_379 5 37 0.00000687769
Hydrangea macrophylla Hma1.2p1_0112F.1 3 CH_hma_60 4 4 0.000000112721
Lotus japonicus chr2 3 CH_lja_8 9 9 1.38783e-23
Lonicera japonica GWHAAZE00000094 3 CH_lonja_83 6 6 0.00000000000000513212
Lactuca sativa Lsat_1_v8_lg_3 3 CH_lsa_273 5 50 0.00000875798
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_322 3 4 0.0000463462
Malus domestica Chr09 3 CH_mdo_331 3 3 0.00000875767
Manihot esculenta Chromosome15 3 CH_mes_116 6 12 0.00000000016431
Manihot esculenta Chromosome07 3 CH_mes_163 4 4 0.000000111475
Manihot esculenta Chromosome17 3 CH_mes_91 6 8 0.00000000000500062
Marchantia polymorpha scaffold_40 3 CH_mpo_130 3 13 0.000860116
Medicago truncatula chr5 3 CH_mtr_20 11 23 2.49115e-26
Nelumbo nucifera chr3 3 CH_nnu_63 4 4 0.00000000796381
Oryza sativa ssp. japonica chr01 3 CH_osa_77 5 8 0.000000000149391
Prunus persica Pp03 3 CH_ppe_21 9 9 4.76658e-22
Pisum sativum chr2LG1 3 CH_psa_136 4 13 0.00000147044
Papaver somniferum NW_020620381.1 3 CH_pso_500 3 4 0.000132955
Populus trichocarpa Chr08 3 CH_ptr_123 5 6 0.000000000251941
Phaseolus vulgaris Chr02 3 CH_pvu_93 4 4 0.00000000870485
Quercus lobata CM012294 3 CH_qlo_503 5 17 0.000000765331
Quercus lobata 6 3 CH_qlo_61 10 13 6.73694e-23
Quercus lobata 10 3 CH_qlo_763 3 3 0.000083267
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_204 5 11 0.00000000328906
Rhododendron simsii chr08 3 CH_rsi_1 30 35 5.81895e-76
Salvia bowleyana GWHASIU00000004 3 CH_sbo_69 6 7 0.0000000000000713592
Salix brachista GWHAAZH00000008 3 CH_sbr_102 4 4 0.0000000112231
Salix brachista GWHAAZH00000019 3 CH_sbr_204 3 3 0.0000154864
Sechium edule LG03 3 CH_sed_153 3 3 0.0000343183
Sechium edule LG11 3 CH_sed_30 6 6 0.0000000000000306271
Sequoiadendron giganteum chr5 3 CH_sgi_128 13 67 1.06205e-19
Solanum tuberosum ST4.03ch05 3 CH_stu_436 3 6 0.000139355
Trochodendron aralioides group8 3 CH_tar_14 8 10 1.20478e-18
Trochodendron aralioides group13 3 CH_tar_251 3 3 0.0000386042
Theobroma cacao Chromosome_10 3 CH_tca_122 4 4 0.0000000149101
Trifolium pratense Tp57577_TGAC_v2_scaf_227 3 CH_tpr_174 3 4 0.0000233695
Tripterygium wilfordii NC_052242.1 3 CH_twi_10 12 32 3.69539e-22
Tripterygium wilfordii NC_052248.1 3 CH_twi_78 6 19 0.00000000941794
Vigna mungo CM024074.1 3 CH_vmu_94 4 7 0.000000250449
Vitis vinifera chr14 3 CH_vvi_73 5 5 0.00000000000389312
Acer truncatum chr11 4 CH_acertr_273 3 3 0.0000446107
Acer truncatum chr12 4 CH_acertr_53 5 5 0.0000000000515561
Actinidia chinensis Lachesis_group3 4 CH_ach_12 6 7 0.0000000000000353765
Aquilegia oxysepala CHR03 4 CH_aox_37 5 9 0.000000000793878
Aquilegia oxysepala CHR03 4 CH_aox_50 4 4 0.00000000926281
Corylus avellana 9 4 CH_cav_100 4 5 0.0000000494273
Carpinus fangiana Cfa06 4 CH_cfa_9 10 13 4.98801e-24
Carpinus fangiana Cfa01 4 CH_cfa_97 4 5 0.0000000357177
Carya illinoinensis Chr02 4 CH_cil_36 8 8 3.35249e-20
Citrullus lanatus CG_Chr09 4 CH_cla_84 3 3 0.0000134578
Cucumis melo chr09 4 CH_cme_2 12 19 1.32365e-29
Chenopodium quinoa C_Quinoa_Scaffold_4244 4 CH_cqu_328 3 4 0.0000441094
Cucumis sativus L. chr5 4 CH_csa_2 14 15 1.18626e-37
Daucus carota DCARv2_Chr9 4 CH_dca_110 4 5 0.0000000682566
Daucus carota DCARv2_Chr2 4 CH_dca_257 3 4 0.000071345
Davidia involucrata GWHABJS00000012 4 CH_din_84 4 4 0.00000000658668
Durio zibethinus NW_019168470.1 4 CH_dzi_217 3 4 0.0000638987
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_23 6 11 0.000000000000334338
Erythranthe guttata scaffold_11 4 CH_egut_100 5 5 0.000000000666904
Erythranthe guttata scaffold_4 4 CH_egut_173 4 4 0.000000366317
Erythranthe guttata scaffold_12 4 CH_egut_174 4 4 0.000000366317
Erythranthe guttata scaffold_4 4 CH_egut_215 4 6 0.00000547836
Fragaria vesca Fvb6 4 CH_fve_115 4 5 0.0000000224242
Glycine max Gm01 4 CH_gma_352 3 4 0.000169305
Glycine max Gm02 4 CH_gma_7 12 16 1.21509e-29
Gossypium raimondii Chr08 4 CH_gra_182 3 3 0.0000126105
Helianthus annuus HanXRQChr13 4 CH_han_347 5 30 0.00000225845
Helianthus annuus HanXRQChr09 4 CH_han_379 5 37 0.00000687769
Hydrangea macrophylla Hma1.2p1_0112F.1 4 CH_hma_60 4 4 0.000000112721
Lotus japonicus chr2 4 CH_lja_8 9 9 1.38783e-23
Lonicera japonica GWHAAZE00000094 4 CH_lonja_83 6 6 0.00000000000000513212
Lactuca sativa Lsat_1_v8_lg_3 4 CH_lsa_273 5 50 0.00000875798
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_322 3 4 0.0000463462
Malus domestica Chr09 4 CH_mdo_331 3 3 0.00000875767
Manihot esculenta Chromosome15 4 CH_mes_116 6 12 0.00000000016431
Manihot esculenta Chromosome07 4 CH_mes_163 4 4 0.000000111475
Manihot esculenta Chromosome17 4 CH_mes_91 6 8 0.00000000000500062
Marchantia polymorpha scaffold_40 4 CH_mpo_130 3 13 0.000860116
Medicago truncatula chr5 4 CH_mtr_20 11 23 2.49115e-26
Nelumbo nucifera chr3 4 CH_nnu_63 4 4 0.00000000796381
Oryza sativa ssp. japonica chr01 4 CH_osa_77 5 8 0.000000000149391
Prunus persica Pp03 4 CH_ppe_21 9 9 4.76658e-22
Pisum sativum chr2LG1 4 CH_psa_136 4 13 0.00000147044
Papaver somniferum NW_020620381.1 4 CH_pso_500 3 4 0.000132955
Populus trichocarpa Chr08 4 CH_ptr_123 5 6 0.000000000251941
Phaseolus vulgaris Chr02 4 CH_pvu_93 4 4 0.00000000870485
Quercus lobata CM012294 4 CH_qlo_503 5 17 0.000000765331
Quercus lobata 6 4 CH_qlo_61 10 13 6.73694e-23
Quercus lobata 10 4 CH_qlo_763 3 3 0.000083267
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_204 5 11 0.00000000328906
Rhododendron simsii chr08 4 CH_rsi_1 30 35 5.81895e-76
Salvia bowleyana GWHASIU00000004 4 CH_sbo_69 6 7 0.0000000000000713592
Salix brachista GWHAAZH00000008 4 CH_sbr_102 4 4 0.0000000112231
Salix brachista GWHAAZH00000019 4 CH_sbr_204 3 3 0.0000154864
Sechium edule LG03 4 CH_sed_153 3 3 0.0000343183
Sechium edule LG11 4 CH_sed_30 6 6 0.0000000000000306271
Sequoiadendron giganteum chr5 4 CH_sgi_128 13 67 1.06205e-19
Solanum tuberosum ST4.03ch05 4 CH_stu_436 3 6 0.000139355
Trochodendron aralioides group8 4 CH_tar_14 8 10 1.20478e-18
Trochodendron aralioides group13 4 CH_tar_251 3 3 0.0000386042
Theobroma cacao Chromosome_10 4 CH_tca_122 4 4 0.0000000149101
Trifolium pratense Tp57577_TGAC_v2_scaf_227 4 CH_tpr_174 3 4 0.0000233695
Tripterygium wilfordii NC_052242.1 4 CH_twi_10 12 32 3.69539e-22
Tripterygium wilfordii NC_052248.1 4 CH_twi_78 6 19 0.00000000941794
Vigna mungo CM024074.1 4 CH_vmu_94 4 7 0.000000250449
Vitis vinifera chr14 4 CH_vvi_73 5 5 0.00000000000389312

Available child term results

Ontology identifier Description Number of clusters
GO:0070505 pollen coat 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001