Functional clusters

Information

  • Type Gene Ontology
  • Description exine

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 3 CH_acertr_54 5 25 0.0000000000589839
Arabidopsis lyrata scaffold_1 3 CH_aly_260 2 2 0.000198013
Arabidopsis thaliana Chr1 3 CH_ath_427 2 2 0.0000859476
Brassica napus A04 3 CH_bna_673 2 2 0.000835275
Brassica napus C03 3 CH_bna_674 2 2 0.000835275
Brassica oleracea C4 3 CH_bol_333 2 2 0.000326861
Brassica rapa A04 3 CH_bra_251 2 3 0.000386368
Capsicum annuum PGAv.1.6.scaffold756 3 CH_can_184 3 3 0.000000573281
Corylus avellana 1 3 CH_cav_126 3 5 0.000000352659
Cardamine hirsuta Chr1 3 CH_chi_301 2 2 0.000207361
Carya illinoinensis Chr13 3 CH_cil_470 2 2 0.000371897
Citrullus lanatus CG_Chr05 3 CH_cla_158 2 2 0.000532269
Cucumis melo chr06 3 CH_cme_85 3 3 0.0000000267031
Corchorus olitorius AWUE01016378.1 3 CH_col_40 3 4 0.0000020475
Capsella rubella scaffold_1 3 CH_cru_307 2 2 0.000438693
Cucumis sativus L. chr3 3 CH_csa_93 3 3 0.0000000418111
Daucus carota DCARv2_Chr9 3 CH_dca_152 3 5 0.00000122006
Davidia involucrata GWHABJS00000016 3 CH_din_376 2 2 0.000500125
Durio zibethinus NW_019168048.1 3 CH_dzi_119 3 4 0.000000451094
Eucalyptus grandis Chr04 3 CH_egr_200 6 43 0.000000000000101761
Eutrema salsugineum scaffold_5 3 CH_esa_207 2 2 0.00022845
Glycine max Gm03 3 CH_gma_135 3 3 0.0000000216099
Lotus japonicus chr3 3 CH_lja_285 2 2 0.000214523
Manihot esculenta Chromosome05 3 CH_mes_90 4 4 0.00000000000341561
Petunia axillaris Peaxi162Scf00103 3 CH_pax_78 3 3 0.000000148503
Phaseolus vulgaris Chr10 3 CH_pvu_254 2 2 0.0000734727
Quercus lobata 4 3 CH_qlo_183 5 10 0.000000000000281949
Sechium edule LG12 3 CH_sed_254 2 2 0.000428052
Theobroma cacao Chromosome_2 3 CH_tca_51 5 9 0.00000000000152213
Tripterygium wilfordii NC_052248.1 3 CH_twi_42 4 7 0.0000000000182311
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_47 4 6 0.0000000000361089
Vigna mungo CM024078.1 3 CH_vmu_78 3 5 0.0000000626227
Acer truncatum chr5 4 CH_acertr_54 5 25 0.0000000000589839
Arabidopsis lyrata scaffold_1 4 CH_aly_260 2 2 0.000198013
Arabidopsis thaliana Chr1 4 CH_ath_427 2 2 0.0000859476
Brassica napus A04 4 CH_bna_673 2 2 0.000835275
Brassica napus C03 4 CH_bna_674 2 2 0.000835275
Brassica oleracea C4 4 CH_bol_333 2 2 0.000326861
Brassica rapa A04 4 CH_bra_251 2 3 0.000386368
Capsicum annuum PGAv.1.6.scaffold756 4 CH_can_184 3 3 0.000000573281
Corylus avellana 1 4 CH_cav_126 3 5 0.000000352659
Cardamine hirsuta Chr1 4 CH_chi_301 2 2 0.000207361
Carya illinoinensis Chr13 4 CH_cil_470 2 2 0.000371897
Citrullus lanatus CG_Chr05 4 CH_cla_158 2 2 0.000532269
Cucumis melo chr06 4 CH_cme_85 3 3 0.0000000267031
Corchorus olitorius AWUE01016378.1 4 CH_col_40 3 4 0.0000020475
Capsella rubella scaffold_1 4 CH_cru_307 2 2 0.000438693
Cucumis sativus L. chr3 4 CH_csa_93 3 3 0.0000000418111
Daucus carota DCARv2_Chr9 4 CH_dca_152 3 5 0.00000122006
Davidia involucrata GWHABJS00000016 4 CH_din_376 2 2 0.000500125
Durio zibethinus NW_019168048.1 4 CH_dzi_119 3 4 0.000000451094
Eucalyptus grandis Chr04 4 CH_egr_200 6 43 0.000000000000101761
Eutrema salsugineum scaffold_5 4 CH_esa_207 2 2 0.00022845
Glycine max Gm03 4 CH_gma_135 3 3 0.0000000216099
Lotus japonicus chr3 4 CH_lja_285 2 2 0.000214523
Manihot esculenta Chromosome05 4 CH_mes_90 4 4 0.00000000000341561
Petunia axillaris Peaxi162Scf00103 4 CH_pax_78 3 3 0.000000148503
Phaseolus vulgaris Chr10 4 CH_pvu_254 2 2 0.0000734727
Quercus lobata 4 4 CH_qlo_183 5 10 0.000000000000281949
Sechium edule LG12 4 CH_sed_254 2 2 0.000428052
Theobroma cacao Chromosome_2 4 CH_tca_51 5 9 0.00000000000152213
Tripterygium wilfordii NC_052248.1 4 CH_twi_42 4 7 0.0000000000182311
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_47 4 6 0.0000000000361089
Vigna mungo CM024078.1 4 CH_vmu_78 3 5 0.0000000626227

Available child term results

Ontology identifier Description Number of clusters
GO:0043674 columella 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001