Functional clusters
Information
- Type Gene Ontology
- Description exine
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 3 | CH_acertr_54 | 5 | 25 | 0.0000000000589839 |
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_260 | 2 | 2 | 0.000198013 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_427 | 2 | 2 | 0.0000859476 |
| Brassica napus | A04 | 3 | CH_bna_673 | 2 | 2 | 0.000835275 |
| Brassica napus | C03 | 3 | CH_bna_674 | 2 | 2 | 0.000835275 |
| Brassica oleracea | C4 | 3 | CH_bol_333 | 2 | 2 | 0.000326861 |
| Brassica rapa | A04 | 3 | CH_bra_251 | 2 | 3 | 0.000386368 |
| Capsicum annuum | PGAv.1.6.scaffold756 | 3 | CH_can_184 | 3 | 3 | 0.000000573281 |
| Corylus avellana | 1 | 3 | CH_cav_126 | 3 | 5 | 0.000000352659 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_301 | 2 | 2 | 0.000207361 |
| Carya illinoinensis | Chr13 | 3 | CH_cil_470 | 2 | 2 | 0.000371897 |
| Citrullus lanatus | CG_Chr05 | 3 | CH_cla_158 | 2 | 2 | 0.000532269 |
| Cucumis melo | chr06 | 3 | CH_cme_85 | 3 | 3 | 0.0000000267031 |
| Corchorus olitorius | AWUE01016378.1 | 3 | CH_col_40 | 3 | 4 | 0.0000020475 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_307 | 2 | 2 | 0.000438693 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_93 | 3 | 3 | 0.0000000418111 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_152 | 3 | 5 | 0.00000122006 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_376 | 2 | 2 | 0.000500125 |
| Durio zibethinus | NW_019168048.1 | 3 | CH_dzi_119 | 3 | 4 | 0.000000451094 |
| Eucalyptus grandis | Chr04 | 3 | CH_egr_200 | 6 | 43 | 0.000000000000101761 |
| Eutrema salsugineum | scaffold_5 | 3 | CH_esa_207 | 2 | 2 | 0.00022845 |
| Glycine max | Gm03 | 3 | CH_gma_135 | 3 | 3 | 0.0000000216099 |
| Lotus japonicus | chr3 | 3 | CH_lja_285 | 2 | 2 | 0.000214523 |
| Manihot esculenta | Chromosome05 | 3 | CH_mes_90 | 4 | 4 | 0.00000000000341561 |
| Petunia axillaris | Peaxi162Scf00103 | 3 | CH_pax_78 | 3 | 3 | 0.000000148503 |
| Phaseolus vulgaris | Chr10 | 3 | CH_pvu_254 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 4 | 3 | CH_qlo_183 | 5 | 10 | 0.000000000000281949 |
| Sechium edule | LG12 | 3 | CH_sed_254 | 2 | 2 | 0.000428052 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_51 | 5 | 9 | 0.00000000000152213 |
| Tripterygium wilfordii | NC_052248.1 | 3 | CH_twi_42 | 4 | 7 | 0.0000000000182311 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_47 | 4 | 6 | 0.0000000000361089 |
| Vigna mungo | CM024078.1 | 3 | CH_vmu_78 | 3 | 5 | 0.0000000626227 |
| Acer truncatum | chr5 | 4 | CH_acertr_54 | 5 | 25 | 0.0000000000589839 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_260 | 2 | 2 | 0.000198013 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_427 | 2 | 2 | 0.0000859476 |
| Brassica napus | A04 | 4 | CH_bna_673 | 2 | 2 | 0.000835275 |
| Brassica napus | C03 | 4 | CH_bna_674 | 2 | 2 | 0.000835275 |
| Brassica oleracea | C4 | 4 | CH_bol_333 | 2 | 2 | 0.000326861 |
| Brassica rapa | A04 | 4 | CH_bra_251 | 2 | 3 | 0.000386368 |
| Capsicum annuum | PGAv.1.6.scaffold756 | 4 | CH_can_184 | 3 | 3 | 0.000000573281 |
| Corylus avellana | 1 | 4 | CH_cav_126 | 3 | 5 | 0.000000352659 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_301 | 2 | 2 | 0.000207361 |
| Carya illinoinensis | Chr13 | 4 | CH_cil_470 | 2 | 2 | 0.000371897 |
| Citrullus lanatus | CG_Chr05 | 4 | CH_cla_158 | 2 | 2 | 0.000532269 |
| Cucumis melo | chr06 | 4 | CH_cme_85 | 3 | 3 | 0.0000000267031 |
| Corchorus olitorius | AWUE01016378.1 | 4 | CH_col_40 | 3 | 4 | 0.0000020475 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_307 | 2 | 2 | 0.000438693 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_93 | 3 | 3 | 0.0000000418111 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_152 | 3 | 5 | 0.00000122006 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_376 | 2 | 2 | 0.000500125 |
| Durio zibethinus | NW_019168048.1 | 4 | CH_dzi_119 | 3 | 4 | 0.000000451094 |
| Eucalyptus grandis | Chr04 | 4 | CH_egr_200 | 6 | 43 | 0.000000000000101761 |
| Eutrema salsugineum | scaffold_5 | 4 | CH_esa_207 | 2 | 2 | 0.00022845 |
| Glycine max | Gm03 | 4 | CH_gma_135 | 3 | 3 | 0.0000000216099 |
| Lotus japonicus | chr3 | 4 | CH_lja_285 | 2 | 2 | 0.000214523 |
| Manihot esculenta | Chromosome05 | 4 | CH_mes_90 | 4 | 4 | 0.00000000000341561 |
| Petunia axillaris | Peaxi162Scf00103 | 4 | CH_pax_78 | 3 | 3 | 0.000000148503 |
| Phaseolus vulgaris | Chr10 | 4 | CH_pvu_254 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 4 | 4 | CH_qlo_183 | 5 | 10 | 0.000000000000281949 |
| Sechium edule | LG12 | 4 | CH_sed_254 | 2 | 2 | 0.000428052 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_51 | 5 | 9 | 0.00000000000152213 |
| Tripterygium wilfordii | NC_052248.1 | 4 | CH_twi_42 | 4 | 7 | 0.0000000000182311 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_47 | 4 | 6 | 0.0000000000361089 |
| Vigna mungo | CM024078.1 | 4 | CH_vmu_78 | 3 | 5 | 0.0000000626227 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0043674 | columella | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |