Functional clusters

Information

  • Type Gene Ontology
  • Description exocyst

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 3 CH_ach_21 5 6 0.000000000919586
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 3 CH_arhy_37 11 21 5.26907e-23
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 3 CH_arhy_55 9 13 1.05174e-19
Brassica carinata ChrC02 3 CH_bca_41 7 11 0.0000000000000894876
Brassica carinata ChrC03 3 CH_bca_60 6 7 0.00000000000168039
Brassica carinata ChrC05 3 CH_bca_650 3 3 0.000156224
Brassica carinata ChrB02 3 CH_bca_901 3 4 0.000624345
Brassica oleracea C4 3 CH_bol_69 5 7 0.00000000126172
Brassica rapa A05 3 CH_bra_106 4 6 0.00000130551
Cicer arietinum L. Ca_LG6_v3 3 CH_car_104 3 3 0.0000766549
Cicer arietinum L. Ca_LG2_v3 3 CH_car_2 9 18 1.49998e-17
Corylus avellana 5 3 CH_cav_80 5 7 0.00000000236773
Coffea canephora chr4 3 CH_ccan_126 4 49 0.00000200461
Cardamine hirsuta Chr3 3 CH_chi_117 4 4 0.0000000905492
Cardamine hirsuta NSCAFB.269 3 CH_chi_238 3 3 0.000070807
Carya illinoinensis Chr13 3 CH_cil_361 3 3 0.0000874821
Cucumis sativus L. chr6 3 CH_csa_172 3 3 0.0000518458
Daucus carota DCARv2_Chr1 3 CH_dca_15 8 12 9.67151e-17
Davidia involucrata GWHABJS00000013 3 CH_din_16 9 9 6.13639e-21
Davidia involucrata GWHABJS00000014 3 CH_din_47 7 12 0.00000000000174398
Erigeron canadensis Conyza_canadensis_scaffold:2 3 CH_eca_287 3 4 0.000101856
Eucalyptus grandis Chr10 3 CH_egr_295 5 6 0.000000000106276
Erythranthe guttata scaffold_9 3 CH_egut_230 4 10 0.0000159692
Gossypium hirsutum A11 3 CH_ghi_458 3 3 0.000148031
Glycine max Gm06 3 CH_gma_114 5 7 0.00000000784017
Glycine max Gm14 3 CH_gma_176 5 12 0.000000293909
Glycine max Gm03 3 CH_gma_272 4 9 0.0000325005
Glycine max Gm02 3 CH_gma_354 3 3 0.000177547
Lupinus albus Lalb_Chr10 3 CH_lal_193 4 8 0.000011101
Lotus japonicus Contig00141 3 CH_lja_116 4 5 0.000000361919
Lonicera japonica GWHAAZE00000005 3 CH_lonja_122 6 6 0.0000000000034911
Lonicera japonica GWHAAZE00000006 3 CH_lonja_379 4 8 0.0000544494
Lonicera japonica GWHAAZE00000008 3 CH_lonja_6 21 35 8.23711e-44
Malus domestica Chr17 3 CH_mdo_260 4 6 0.000000663378
Manihot esculenta Chromosome10 3 CH_mes_340 3 4 0.000204291
Medicago truncatula chr5 3 CH_mtr_1 26 37 2.5169e-63
Olea europaea chr10 3 CH_oeu_11 8 20 0.00000000000000572868
Oryza sativa ssp. japonica chr05 3 CH_osa_176 4 5 0.000000871846
Oryza sativa ssp. japonica chr07 3 CH_osa_426 3 4 0.000489137
Pisum sativum chr2LG1 3 CH_psa_22 8 19 9.59117e-16
Populus trichocarpa Chr17 3 CH_ptr_196 4 4 0.000000122752
Phaseolus vulgaris Chr08 3 CH_pvu_18 13 54 4.05476e-21
Quercus lobata 7 3 CH_qlo_231 6 9 0.0000000000178524
Quercus lobata 1 3 CH_qlo_768 4 13 0.0000924767
Quercus lobata 4 3 CH_qlo_862 4 16 0.000234649
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_217 4 4 0.00000000683519
Rhododendron simsii chr12 3 CH_rsi_321 3 3 0.0000253609
Simmondsia chinensis GWHAASQ00000010 3 CH_sci_133 4 15 0.0000439622
Sequoiadendron giganteum chr11 3 CH_sgi_394 5 6 0.000000000215454
Sequoiadendron giganteum chr8 3 CH_sgi_920 3 3 0.0000408669
Solanum tuberosum ST4.03ch09 3 CH_stu_421 3 4 0.000103063
Tarenaya hassleriana NW_010965775.1 3 CH_tha_94 3 3 0.0000478974
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_194 3 3 0.0000582231
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_195 3 3 0.0000582231
Vitis vinifera chr9 3 CH_vvi_230 4 13 0.0000164584
Actinidia chinensis Lachesis_group17 4 CH_ach_21 5 6 0.000000000919586
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 4 CH_arhy_37 11 21 5.26907e-23
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 4 CH_arhy_55 9 13 1.05174e-19
Brassica carinata ChrC02 4 CH_bca_41 7 11 0.0000000000000894876
Brassica carinata ChrC03 4 CH_bca_60 6 7 0.00000000000168039
Brassica carinata ChrC05 4 CH_bca_650 3 3 0.000156224
Brassica carinata ChrB02 4 CH_bca_901 3 4 0.000624345
Brassica oleracea C4 4 CH_bol_69 5 7 0.00000000126172
Brassica rapa A05 4 CH_bra_106 4 6 0.00000130551
Cicer arietinum L. Ca_LG6_v3 4 CH_car_104 3 3 0.0000766549
Cicer arietinum L. Ca_LG2_v3 4 CH_car_2 9 18 1.49998e-17
Corylus avellana 5 4 CH_cav_80 5 7 0.00000000236773
Coffea canephora chr4 4 CH_ccan_126 4 49 0.00000200461
Cardamine hirsuta Chr3 4 CH_chi_117 4 4 0.0000000905492
Cardamine hirsuta NSCAFB.269 4 CH_chi_238 3 3 0.000070807
Carya illinoinensis Chr13 4 CH_cil_361 3 3 0.0000874821
Cucumis sativus L. chr6 4 CH_csa_172 3 3 0.0000518458
Daucus carota DCARv2_Chr1 4 CH_dca_15 8 12 9.67151e-17
Davidia involucrata GWHABJS00000013 4 CH_din_16 9 9 6.13639e-21
Davidia involucrata GWHABJS00000014 4 CH_din_47 7 12 0.00000000000174398
Erigeron canadensis Conyza_canadensis_scaffold:2 4 CH_eca_287 3 4 0.000101856
Eucalyptus grandis Chr10 4 CH_egr_295 5 6 0.000000000106276
Erythranthe guttata scaffold_9 4 CH_egut_230 4 10 0.0000159692
Gossypium hirsutum A11 4 CH_ghi_458 3 3 0.000148031
Glycine max Gm06 4 CH_gma_114 5 7 0.00000000784017
Glycine max Gm14 4 CH_gma_176 5 12 0.000000293909
Glycine max Gm03 4 CH_gma_272 4 9 0.0000325005
Glycine max Gm02 4 CH_gma_354 3 3 0.000177547
Lupinus albus Lalb_Chr10 4 CH_lal_193 4 8 0.000011101
Lotus japonicus Contig00141 4 CH_lja_116 4 5 0.000000361919
Lonicera japonica GWHAAZE00000005 4 CH_lonja_122 6 6 0.0000000000034911
Lonicera japonica GWHAAZE00000006 4 CH_lonja_379 4 8 0.0000544494
Lonicera japonica GWHAAZE00000008 4 CH_lonja_6 21 35 8.23711e-44
Malus domestica Chr17 4 CH_mdo_260 4 6 0.000000663378
Manihot esculenta Chromosome10 4 CH_mes_340 3 4 0.000204291
Medicago truncatula chr5 4 CH_mtr_1 26 37 2.5169e-63
Olea europaea chr10 4 CH_oeu_11 8 20 0.00000000000000572868
Oryza sativa ssp. japonica chr05 4 CH_osa_176 4 5 0.000000871846
Oryza sativa ssp. japonica chr07 4 CH_osa_426 3 4 0.000489137
Pisum sativum chr2LG1 4 CH_psa_22 8 19 9.59117e-16
Populus trichocarpa Chr17 4 CH_ptr_196 4 4 0.000000122752
Phaseolus vulgaris Chr08 4 CH_pvu_18 13 54 4.05476e-21
Quercus lobata 7 4 CH_qlo_231 6 9 0.0000000000178524
Quercus lobata 1 4 CH_qlo_768 4 13 0.0000924767
Quercus lobata 4 4 CH_qlo_862 4 16 0.000234649
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_217 4 4 0.00000000683519
Rhododendron simsii chr12 4 CH_rsi_321 3 3 0.0000253609
Simmondsia chinensis GWHAASQ00000010 4 CH_sci_133 4 15 0.0000439622
Sequoiadendron giganteum chr11 4 CH_sgi_394 5 6 0.000000000215454
Sequoiadendron giganteum chr8 4 CH_sgi_920 3 3 0.0000408669
Solanum tuberosum ST4.03ch09 4 CH_stu_421 3 4 0.000103063
Tarenaya hassleriana NW_010965775.1 4 CH_tha_94 3 3 0.0000478974
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_194 3 3 0.0000582231
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_195 3 3 0.0000582231
Vitis vinifera chr9 4 CH_vvi_230 4 13 0.0000164584

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001