Functional clusters

Information

  • Type Gene Ontology
  • Description isomerase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 3 CH_aag_170 5 13 0.000652487
Cannabis sativa NC_044372.1 3 CH_cansat_255 5 11 0.000179047
Carpinus fangiana Cfa03 3 CH_cfa_182 5 7 0.0000102915
Eucalyptus grandis Chr02 3 CH_egr_728 8 50 0.000106367
Erythranthe guttata scaffold_11 3 CH_egut_194 5 5 0.00000158303
Rhododendron simsii chr08 3 CH_rsi_480 4 5 0.000577214
Solanum lycopersicum SL4.0ch02 3 CH_sly_142 6 6 0.0000000106047
Anthoceros agrestis Sc2ySwM_228 4 CH_aag_170 5 13 0.000652487
Cannabis sativa NC_044372.1 4 CH_cansat_255 5 11 0.000179047
Carpinus fangiana Cfa03 4 CH_cfa_182 5 7 0.0000102915
Eucalyptus grandis Chr02 4 CH_egr_728 8 50 0.000106367
Erythranthe guttata scaffold_11 4 CH_egut_194 5 5 0.00000158303
Rhododendron simsii chr08 4 CH_rsi_480 4 5 0.000577214
Solanum lycopersicum SL4.0ch02 4 CH_sly_142 6 6 0.0000000106047

Available child term results

Ontology identifier Description Number of clusters
GO:0000247 C-8 sterol isomerase activity 18
GO:0000250 lanosterol synthase activity 236
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 28
GO:0003756 protein disulfide isomerase activity 4
GO:0003916 DNA topoisomerase activity 10
GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity 38
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 14
GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity 20
GO:0003978 UDP-glucose 4-epimerase activity 4
GO:0004034 aldose 1-epimerase activity 6
GO:0004106 chorismate mutase activity 6
GO:0004165 dodecenoyl-CoA delta-isomerase activity 74
GO:0004347 glucose-6-phosphate isomerase activity 16
GO:0004452 isopentenyl-diphosphate delta-isomerase activity 2
GO:0004476 mannose-6-phosphate isomerase activity 8
GO:0004512 inositol-3-phosphate synthase activity 10
GO:0004614 phosphoglucomutase activity 4
GO:0004615 phosphomannomutase activity 16
GO:0004640 phosphoribosylanthranilate isomerase activity 6
GO:0004751 ribose-5-phosphate isomerase activity 10
GO:0004807 triose-phosphate isomerase activity 14
GO:0008837 diaminopimelate epimerase activity 4
GO:0008909 isochorismate synthase activity 18
GO:0009045 xylose isomerase activity 2
GO:0009905 ent-copalyl diphosphate synthase activity 10
GO:0009982 pseudouridine synthase activity 18
GO:0016034 maleylacetoacetate isomerase activity 52
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 2
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 4
GO:0016866 intramolecular transferase activity 8
GO:0016868 intramolecular transferase activity, phosphotransferases 4
GO:0016872 intramolecular lyase activity 30
GO:0018114 threonine racemase activity 4
GO:0030378 serine racemase activity 10
GO:0034020 neoxanthin synthase activity 8
GO:0034074 marneral synthase activity 8
GO:0034335 DNA negative supercoiling activity 4
GO:0036361 racemase activity, acting on amino acids and derivatives 2
GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity 6
GO:0045430 chalcone isomerase activity 68
GO:0045435 lycopene epsilon cyclase activity 2
GO:0045436 lycopene beta cyclase activity 6
GO:0046423 allene-oxide cyclase activity 26
GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 12
GO:0046608 carotenoid isomerase activity 4
GO:0047661 amino-acid racemase activity 62
GO:0047793 cycloeucalenol cycloisomerase activity 6
GO:0047918 GDP-mannose 3,5-epimerase activity 10
GO:0050220 prostaglandin-E synthase activity 2
GO:0050373 UDP-arabinose 4-epimerase activity 4
GO:0050486 intramolecular transferase activity, transferring hydroxy groups 6
GO:0051750 delta3,5-delta2,4-dienoyl-CoA isomerase activity 6
GO:0052691 UDP-arabinopyranose mutase activity 10
GO:0052856 NADHX epimerase activity 6
GO:0090471 9,15,9'-tri-cis-zeta-carotene isomerase activity 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001