Functional clusters
Information
- Type Gene Ontology
- Description DNA topoisomerase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Coffea canephora | chr7 | 3 | CH_ccan_294 | 2 | 3 | 0.000191651 |
| Magnolia biondii | Chr07 | 3 | CH_mbi_185 | 4 | 15 | 0.0000000590303 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_446 | 3 | 5 | 0.0000162031 |
| Sapria himalayana | scaffold37_5694058 | 3 | CH_shi_72 | 3 | 3 | 0.000000274654 |
| Tripterygium wilfordii | NC_052247.1 | 3 | CH_twi_129 | 3 | 3 | 0.000000770316 |
| Coffea canephora | chr7 | 4 | CH_ccan_294 | 2 | 3 | 0.000191651 |
| Magnolia biondii | Chr07 | 4 | CH_mbi_185 | 4 | 15 | 0.0000000590303 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_446 | 3 | 5 | 0.0000162031 |
| Sapria himalayana | scaffold37_5694058 | 4 | CH_shi_72 | 3 | 3 | 0.000000274654 |
| Tripterygium wilfordii | NC_052247.1 | 4 | CH_twi_129 | 3 | 3 | 0.000000770316 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | 38 |
| GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | 14 |
| GO:0034335 | DNA negative supercoiling activity | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |