Functional clusters

Information

  • Type Gene Ontology
  • Description lanosterol synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 3 CH_aar_101 3 3 0.00000206013
Aethionema arabicum LG-4 3 CH_aar_181 4 49 0.000157158
Acer truncatum chr7 3 CH_acertr_185 3 3 0.00000123008
Actinidia chinensis Lachesis_group6 3 CH_ach_70 3 3 0.00000126593
Actinidia chinensis Lachesis_group25 3 CH_ach_87 3 4 0.00000506254
Arabidopsis lyrata scaffold_2 3 CH_aly_44 7 58 0.0000000000612299
Avicennia marina ScioBoG_102840_HRSCAF_103099 3 CH_ama_30 3 3 0.00000245339
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 3 CH_amhyb_70 3 3 0.0000023383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_13 14 22 1.22356e-36
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_26 11 17 6.43988e-28
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 3 CH_arhy_409 3 3 0.0000132834
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 3 CH_arhy_410 3 3 0.0000132834
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 3 CH_arhy_511 3 5 0.00013272
Arabidopsis thaliana Chr1 3 CH_ath_79 6 71 0.000000000308785
Brassica carinata ChrB06 3 CH_bca_342 3 3 0.0000015765
Brassica napus C05 3 CH_bna_562 3 14 0.000371859
Brassica oleracea C5 3 CH_bol_296 3 15 0.000160177
Brassica rapa A05 3 CH_bra_269 3 18 0.000495084
Camellia sinensis var. sinensis Chr8 3 CH_camsi_1 30 47 2.36581e-79
Camellia sinensis var. sinensis Chr14 3 CH_camsi_190 5 10 0.00000000904113
Camellia sinensis var. sinensis Chr10 3 CH_camsi_733 3 5 0.000417115
Cannabis sativa NC_044373.1 3 CH_cansat_199 4 28 0.0000527131
Cicer arietinum L. Ca_LG8_v3 3 CH_car_17 5 36 0.0000000057868
Corylus avellana 1 3 CH_cav_36 6 8 0.000000000000224442
Corylus avellana 7 3 CH_cav_81 5 10 0.00000000276745
Corylus avellana 11 3 CH_cav_86 4 4 0.0000000143684
Coffea canephora chr0 3 CH_ccan_224 3 19 0.000068504
Citrus clementina scaffold_4 3 CH_ccl_39 6 7 0.00000000000000100402
Cardamine hirsuta Chr2 3 CH_chi_13 8 8 1.79593e-22
Cardamine hirsuta Chr5 3 CH_chi_194 3 4 0.0000277657
Carya illinoinensis Chr16 3 CH_cil_125 5 7 0.000000000047272
Carya illinoinensis Chr02 3 CH_cil_280 3 3 0.00000766477
Carya illinoinensis Chr01 3 CH_cil_59 7 11 1.71154e-16
Carya illinoinensis Chr15 3 CH_cil_72 6 8 0.0000000000000312587
Cucumis melo chr09 3 CH_cme_88 4 9 0.000000055488
Carica papaya supercontig_10 3 CH_cpa_90 3 3 0.0000022369
Chenopodium quinoa C_Quinoa_Scaffold_2716 3 CH_cqu_126 4 5 0.000000014125
Chenopodium quinoa C_Quinoa_Scaffold_1677 3 CH_cqu_64 5 6 0.00000000000763028
Chenopodium quinoa C_Quinoa_Scaffold_2487 3 CH_cqu_77 5 8 0.0000000000711619
Capsella rubella scaffold_2 3 CH_cru_57 4 4 0.0000000000820908
Cucumis sativus L. chr5 3 CH_csa_149 3 4 0.0000119537
Cucumis sativus L. chr2 3 CH_csa_30 6 9 0.0000000000000131397
Daucus carota DCARv2_Chr5 3 CH_dca_409 2 2 0.000956663
Davidia involucrata GWHABJS00000001 3 CH_din_112 4 8 0.000000101697
Davidia involucrata GWHABJS00000017 3 CH_din_176 3 3 0.00000363566
Davidia involucrata GWHABJS00000016 3 CH_din_225 3 5 0.0000363329
Davidia involucrata GWHABJS00000003 3 CH_din_42 5 5 0.00000000000054569
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_273 3 9 0.0000557577
Eucalyptus grandis Chr06 3 CH_egr_63 9 11 2.19275e-23
Eucalyptus grandis Chr02 3 CH_egr_892 3 9 0.000989681
Fragaria x ananassa Fvb6-3 3 CH_fan_110 4 6 0.000000011661
Fragaria x ananassa Fvb6-1 3 CH_fan_122 4 7 0.0000000272029
Fragaria x ananassa Fvb6-2 3 CH_fan_452 3 10 0.00033574
Fragaria x ananassa Fvb6-4 3 CH_fan_63 6 38 0.000000000148181
Fragaria vesca Fvb6 3 CH_fve_125 4 11 0.0000000667063
Gossypium hirsutum D06 3 CH_ghi_82 5 6 0.000000000000162059
Glycine max Gm03 3 CH_gma_247 3 6 0.0000123549
Gossypium raimondii Chr10 3 CH_gra_26 6 7 2.70419e-16
Hydrangea macrophylla Hma1.2p1_0286F.1 3 CH_hma_19 6 18 0.0000000000032547
Lupinus albus Lalb_Chr22 3 CH_lal_134 3 4 0.000000578379
Lotus japonicus chr2 3 CH_lja_29 5 6 0.000000000000931831
Lotus japonicus chr3 3 CH_lja_62 5 17 0.000000000958448
Lonicera japonica GWHAAZE00000002 3 CH_lonja_338 3 3 0.0000139878
Lonicera japonica GWHAAZE00000007 3 CH_lonja_475 3 6 0.000279297
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_139 4 5 0.00000000986667
Lactuca sativa Lsat_1_v8_lg_6 3 CH_lsa_296 3 4 0.0000180656
Magnolia biondii Chr13 3 CH_mbi_82 4 5 0.0000000000257743
Malus domestica Chr17 3 CH_mdo_17 8 9 2.5219e-21
Malus domestica Chr09 3 CH_mdo_221 4 7 0.00000017994
Malus domestica Chr17 3 CH_mdo_36 8 24 2.04833e-16
Medicago truncatula chr8 3 CH_mtr_103 6 17 0.000000000000603812
Nelumbo nucifera chr8 3 CH_nnu_15 8 30 3.32151e-18
Oryza sativa ssp. japonica chr11 3 CH_osa_237 3 7 0.00000920062
Oryza sativa ssp. japonica chr02 3 CH_osa_56 5 10 0.000000000011636
Punica granatum NC_045134.1 3 CH_pgr_96 5 24 0.00000000126966
Prunus persica Pp03 3 CH_ppe_14 9 12 2.13903e-25
Pisum sativum chr1LG6 3 CH_psa_78 4 13 0.0000000383197
Papaver somniferum NC_039364.1 3 CH_pso_169 4 7 0.00000000120158
Populus trichocarpa Chr14 3 CH_ptr_251 3 3 0.0000022802
Populus trichocarpa Chr07 3 CH_ptr_294 3 6 0.0000455645
Phaseolus vulgaris Chr04 3 CH_pvu_195 3 4 0.0000147323
Phaseolus vulgaris Chr06 3 CH_pvu_31 7 10 9.56296e-18
Quercus lobata 5 3 CH_qlo_340 5 8 0.00000000698969
Quercus lobata 5 3 CH_qlo_394 5 10 0.0000000313898
Quercus lobata 11 3 CH_qlo_7 17 28 4.35974e-39
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_199 5 11 0.00000000242812
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_455 4 17 0.0000208443
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_7 16 54 2.99552e-35
Rhododendron simsii chr02 3 CH_rsi_48 9 26 1.7291e-18
Rhododendron simsii chr03 3 CH_rsi_62 7 11 6.48469e-16
Salvia bowleyana GWHASIU00000002 3 CH_sbo_127 4 7 0.00000000209738
Salvia bowleyana GWHASIU00000004 3 CH_sbo_213 3 3 0.000000683137
Salix brachista GWHAAZH00000007 3 CH_sbr_198 3 4 0.0000133377
Simmondsia chinensis GWHAASQ00000006 3 CH_sci_61 3 4 0.000000173977
Sequoiadendron giganteum chr5 3 CH_sgi_290 4 5 0.00000000000173422
Solanum lycopersicum SL4.0ch12 3 CH_sly_204 3 3 0.000000620117
Solanum lycopersicum SL4.0ch12 3 CH_sly_205 3 3 0.000000620117
Selaginella moellendorffii scaffold_98 3 CH_smo_175 2 2 0.000560224
Schrenkiella parvula ch5-7 3 CH_spa_50 3 3 0.000000185978
Solanum pennellii Spenn-ch12 3 CH_spe_171 3 4 0.000000997006
Solanum tuberosum ST4.03ch12 3 CH_stu_48 6 10 1.4025e-16
Selenicereus undatus Scaffold_33675 3 CH_sun_3 12 30 1.11731e-28
Trochodendron aralioides group10 3 CH_tar_24 7 30 0.0000000000000128328
Theobroma cacao Chromosome_6 3 CH_tca_239 3 6 0.0000265318
Tarenaya hassleriana NW_010964598.1 3 CH_tha_25 4 4 0.000000000506076
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_173 3 4 0.0000233695
Trifolium pratense Tp57577_TGAC_v2_scaf_349 3 CH_tpr_65 4 5 0.00000001548
Tripterygium wilfordii NC_052232.1 3 CH_twi_219 3 6 0.0000913945
Utricularia gibba unitig_578 3 CH_ugi_12 5 8 0.0000000000244791
Utricularia gibba unitig_748 3 CH_ugi_8 7 12 3.26294e-17
Vigna mungo CM024077.1 3 CH_vmu_135 3 4 0.00000716253
Vigna mungo CM024075.1 3 CH_vmu_15 6 17 0.000000000000537002
Vitis vinifera chr9 3 CH_vvi_1 29 46 4.06377e-65
Vitis vinifera chr4 3 CH_vvi_170 4 4 0.000000521554
Vitis vinifera chr10_random 3 CH_vvi_171 4 4 0.000000521554
Vitis vinifera chr10 3 CH_vvi_7 15 18 3.1136e-34
Zea mays 1 3 CH_zma_140 3 3 0.00000266676
Zea mays 8 3 CH_zma_141 3 3 0.00000266676
Aethionema arabicum LG-4 4 CH_aar_101 3 3 0.00000206013
Aethionema arabicum LG-4 4 CH_aar_181 4 49 0.000157158
Acer truncatum chr7 4 CH_acertr_185 3 3 0.00000123008
Actinidia chinensis Lachesis_group6 4 CH_ach_70 3 3 0.00000126593
Actinidia chinensis Lachesis_group25 4 CH_ach_87 3 4 0.00000506254
Arabidopsis lyrata scaffold_2 4 CH_aly_44 7 58 0.0000000000612299
Avicennia marina ScioBoG_102840_HRSCAF_103099 4 CH_ama_30 3 3 0.00000245339
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 4 CH_amhyb_70 3 3 0.0000023383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_13 14 22 1.22356e-36
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_26 11 17 6.43988e-28
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 4 CH_arhy_409 3 3 0.0000132834
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 4 CH_arhy_410 3 3 0.0000132834
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 4 CH_arhy_511 3 5 0.00013272
Arabidopsis thaliana Chr1 4 CH_ath_79 6 71 0.000000000308785
Brassica carinata ChrB06 4 CH_bca_342 3 3 0.0000015765
Brassica napus C05 4 CH_bna_562 3 14 0.000371859
Brassica oleracea C5 4 CH_bol_296 3 15 0.000160177
Brassica rapa A05 4 CH_bra_269 3 18 0.000495084
Camellia sinensis var. sinensis Chr8 4 CH_camsi_1 30 47 2.36581e-79
Camellia sinensis var. sinensis Chr14 4 CH_camsi_190 5 10 0.00000000904113
Camellia sinensis var. sinensis Chr10 4 CH_camsi_733 3 5 0.000417115
Cannabis sativa NC_044373.1 4 CH_cansat_199 4 28 0.0000527131
Cicer arietinum L. Ca_LG8_v3 4 CH_car_17 5 36 0.0000000057868
Corylus avellana 1 4 CH_cav_36 6 8 0.000000000000224442
Corylus avellana 7 4 CH_cav_81 5 10 0.00000000276745
Corylus avellana 11 4 CH_cav_86 4 4 0.0000000143684
Coffea canephora chr0 4 CH_ccan_224 3 19 0.000068504
Citrus clementina scaffold_4 4 CH_ccl_39 6 7 0.00000000000000100402
Cardamine hirsuta Chr2 4 CH_chi_13 8 8 1.79593e-22
Cardamine hirsuta Chr5 4 CH_chi_194 3 4 0.0000277657
Carya illinoinensis Chr16 4 CH_cil_125 5 7 0.000000000047272
Carya illinoinensis Chr02 4 CH_cil_280 3 3 0.00000766477
Carya illinoinensis Chr01 4 CH_cil_59 7 11 1.71154e-16
Carya illinoinensis Chr15 4 CH_cil_72 6 8 0.0000000000000312587
Cucumis melo chr09 4 CH_cme_88 4 9 0.000000055488
Carica papaya supercontig_10 4 CH_cpa_90 3 3 0.0000022369
Chenopodium quinoa C_Quinoa_Scaffold_2716 4 CH_cqu_126 4 5 0.000000014125
Chenopodium quinoa C_Quinoa_Scaffold_1677 4 CH_cqu_64 5 6 0.00000000000763028
Chenopodium quinoa C_Quinoa_Scaffold_2487 4 CH_cqu_77 5 8 0.0000000000711619
Capsella rubella scaffold_2 4 CH_cru_57 4 4 0.0000000000820908
Cucumis sativus L. chr5 4 CH_csa_149 3 4 0.0000119537
Cucumis sativus L. chr2 4 CH_csa_30 6 9 0.0000000000000131397
Daucus carota DCARv2_Chr5 4 CH_dca_409 2 2 0.000956663
Davidia involucrata GWHABJS00000001 4 CH_din_112 4 8 0.000000101697
Davidia involucrata GWHABJS00000017 4 CH_din_176 3 3 0.00000363566
Davidia involucrata GWHABJS00000016 4 CH_din_225 3 5 0.0000363329
Davidia involucrata GWHABJS00000003 4 CH_din_42 5 5 0.00000000000054569
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_273 3 9 0.0000557577
Eucalyptus grandis Chr06 4 CH_egr_63 9 11 2.19275e-23
Eucalyptus grandis Chr02 4 CH_egr_892 3 9 0.000989681
Fragaria x ananassa Fvb6-3 4 CH_fan_110 4 6 0.000000011661
Fragaria x ananassa Fvb6-1 4 CH_fan_122 4 7 0.0000000272029
Fragaria x ananassa Fvb6-2 4 CH_fan_452 3 10 0.00033574
Fragaria x ananassa Fvb6-4 4 CH_fan_63 6 38 0.000000000148181
Fragaria vesca Fvb6 4 CH_fve_125 4 11 0.0000000667063
Gossypium hirsutum D06 4 CH_ghi_82 5 6 0.000000000000162059
Glycine max Gm03 4 CH_gma_247 3 6 0.0000123549
Gossypium raimondii Chr10 4 CH_gra_26 6 7 2.70419e-16
Hydrangea macrophylla Hma1.2p1_0286F.1 4 CH_hma_19 6 18 0.0000000000032547
Lupinus albus Lalb_Chr22 4 CH_lal_134 3 4 0.000000578379
Lotus japonicus chr2 4 CH_lja_29 5 6 0.000000000000931831
Lotus japonicus chr3 4 CH_lja_62 5 17 0.000000000958448
Lonicera japonica GWHAAZE00000002 4 CH_lonja_338 3 3 0.0000139878
Lonicera japonica GWHAAZE00000007 4 CH_lonja_475 3 6 0.000279297
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_139 4 5 0.00000000986667
Lactuca sativa Lsat_1_v8_lg_6 4 CH_lsa_296 3 4 0.0000180656
Magnolia biondii Chr13 4 CH_mbi_82 4 5 0.0000000000257743
Malus domestica Chr17 4 CH_mdo_17 8 9 2.5219e-21
Malus domestica Chr09 4 CH_mdo_221 4 7 0.00000017994
Malus domestica Chr17 4 CH_mdo_36 8 24 2.04833e-16
Medicago truncatula chr8 4 CH_mtr_103 6 17 0.000000000000603812
Nelumbo nucifera chr8 4 CH_nnu_15 8 30 3.32151e-18
Oryza sativa ssp. japonica chr11 4 CH_osa_237 3 7 0.00000920062
Oryza sativa ssp. japonica chr02 4 CH_osa_56 5 10 0.000000000011636
Punica granatum NC_045134.1 4 CH_pgr_96 5 24 0.00000000126966
Prunus persica Pp03 4 CH_ppe_14 9 12 2.13903e-25
Pisum sativum chr1LG6 4 CH_psa_78 4 13 0.0000000383197
Papaver somniferum NC_039364.1 4 CH_pso_169 4 7 0.00000000120158
Populus trichocarpa Chr14 4 CH_ptr_251 3 3 0.0000022802
Populus trichocarpa Chr07 4 CH_ptr_294 3 6 0.0000455645
Phaseolus vulgaris Chr04 4 CH_pvu_195 3 4 0.0000147323
Phaseolus vulgaris Chr06 4 CH_pvu_31 7 10 9.56296e-18
Quercus lobata 5 4 CH_qlo_340 5 8 0.00000000698969
Quercus lobata 5 4 CH_qlo_394 5 10 0.0000000313898
Quercus lobata 11 4 CH_qlo_7 17 28 4.35974e-39
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_199 5 11 0.00000000242812
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_455 4 17 0.0000208443
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_7 16 54 2.99552e-35
Rhododendron simsii chr02 4 CH_rsi_48 9 26 1.7291e-18
Rhododendron simsii chr03 4 CH_rsi_62 7 11 6.48469e-16
Salvia bowleyana GWHASIU00000002 4 CH_sbo_127 4 7 0.00000000209738
Salvia bowleyana GWHASIU00000004 4 CH_sbo_213 3 3 0.000000683137
Salix brachista GWHAAZH00000007 4 CH_sbr_198 3 4 0.0000133377
Simmondsia chinensis GWHAASQ00000006 4 CH_sci_61 3 4 0.000000173977
Sequoiadendron giganteum chr5 4 CH_sgi_290 4 5 0.00000000000173422
Solanum lycopersicum SL4.0ch12 4 CH_sly_204 3 3 0.000000620117
Solanum lycopersicum SL4.0ch12 4 CH_sly_205 3 3 0.000000620117
Selaginella moellendorffii scaffold_98 4 CH_smo_175 2 2 0.000560224
Schrenkiella parvula ch5-7 4 CH_spa_50 3 3 0.000000185978
Solanum pennellii Spenn-ch12 4 CH_spe_171 3 4 0.000000997006
Solanum tuberosum ST4.03ch12 4 CH_stu_48 6 10 1.4025e-16
Selenicereus undatus Scaffold_33675 4 CH_sun_3 12 30 1.11731e-28
Trochodendron aralioides group10 4 CH_tar_24 7 30 0.0000000000000128328
Theobroma cacao Chromosome_6 4 CH_tca_239 3 6 0.0000265318
Tarenaya hassleriana NW_010964598.1 4 CH_tha_25 4 4 0.000000000506076
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_173 3 4 0.0000233695
Trifolium pratense Tp57577_TGAC_v2_scaf_349 4 CH_tpr_65 4 5 0.00000001548
Tripterygium wilfordii NC_052232.1 4 CH_twi_219 3 6 0.0000913945
Utricularia gibba unitig_578 4 CH_ugi_12 5 8 0.0000000000244791
Utricularia gibba unitig_748 4 CH_ugi_8 7 12 3.26294e-17
Vigna mungo CM024077.1 4 CH_vmu_135 3 4 0.00000716253
Vigna mungo CM024075.1 4 CH_vmu_15 6 17 0.000000000000537002
Vitis vinifera chr9 4 CH_vvi_1 29 46 4.06377e-65
Vitis vinifera chr4 4 CH_vvi_170 4 4 0.000000521554
Vitis vinifera chr10_random 4 CH_vvi_171 4 4 0.000000521554
Vitis vinifera chr10 4 CH_vvi_7 15 18 3.1136e-34
Zea mays 1 4 CH_zma_140 3 3 0.00000266676
Zea mays 8 4 CH_zma_141 3 3 0.00000266676

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001