Functional clusters

Information

  • Type Gene Ontology
  • Description dodecenoyl-CoA delta-isomerase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 3 CH_acertr_118 3 3 0.00000002982
Arabidopsis lyrata scaffold_7 3 CH_aly_254 2 2 0.000198013
Arabidopsis thaliana Chr4 3 CH_ath_608 2 3 0.000859439
Camellia sinensis var. sinensis Chr5 3 CH_camsi_685 2 2 0.000275128
Cannabis sativa NC_044373.1 3 CH_cansat_333 2 3 0.000590945
Coffea canephora chr2 3 CH_ccan_380 2 5 0.000638821
Cardamine hirsuta Chr7 3 CH_chi_288 2 2 0.000207361
Carya illinoinensis Chr15 3 CH_cil_460 2 2 0.000371897
Capsella rubella scaffold_7 3 CH_cru_271 2 2 0.000219346
Cucumis sativus L. chr3 3 CH_csa_49 4 4 0.00000000000872629
Daucus carota DCARv2_Chr4 3 CH_dca_140 3 3 0.000000512531
Erigeron canadensis Conyza_canadensis_scaffold:1 3 CH_eca_17 5 5 0.00000000000000170301
Eucalyptus grandis Chr10 3 CH_egr_763 2 2 0.000175582
Eutrema salsugineum scaffold_1 3 CH_esa_193 2 2 0.00022845
Gossypium hirsutum A01 3 CH_ghi_700 2 2 0.000961256
Gossypium hirsutum D01 3 CH_ghi_701 2 2 0.000961256
Gossypium hirsutum D02 3 CH_ghi_702 2 2 0.000961256
Gossypium raimondii Chr02 3 CH_gra_338 2 2 0.000536107
Gossypium raimondii Chr05 3 CH_gra_339 2 2 0.000536107
Magnolia biondii Chr06 3 CH_mbi_197 3 7 0.000000123821
Malus domestica Chr01 3 CH_mdo_543 2 2 0.000227527
Medicago truncatula chr7 3 CH_mtr_659 2 3 0.000369764
Olea europaea chr10 3 CH_oeu_288 2 2 0.000320273
Olea europaea chr18 3 CH_oeu_289 2 2 0.000320273
Oryza sativa ssp. japonica chr11 3 CH_osa_404 3 22 0.000359953
Petunia axillaris Peaxi162Scf00069 3 CH_pax_339 2 2 0.000703556
Punica granatum NC_045134.1 3 CH_pgr_175 3 4 0.00000118224
Pisum sativum chr1LG6 3 CH_psa_356 2 2 0.000521635
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_589 2 2 0.000119596
Rhododendron simsii chr09 3 CH_rsi_457 2 2 0.000387184
Salvia bowleyana GWHASIU00000003 3 CH_sbo_60 5 8 0.0000000000000107988
Sechium edule LG12 3 CH_sed_209 2 2 0.000214026
Sequoiadendron giganteum chr2 3 CH_sgi_251 5 12 0.000000000000200688
Schrenkiella parvula ch7-4 3 CH_spa_41 3 3 0.0000000371957
Theobroma cacao Chromosome_4 3 CH_tca_329 2 2 0.000219716
Tarenaya hassleriana NW_010966881.1 3 CH_tha_120 3 17 0.000173832
Tripterygium wilfordii NC_052252.1 3 CH_twi_281 2 2 0.000334728
Acer truncatum chr12 4 CH_acertr_118 3 3 0.00000002982
Arabidopsis lyrata scaffold_7 4 CH_aly_254 2 2 0.000198013
Arabidopsis thaliana Chr4 4 CH_ath_608 2 3 0.000859439
Camellia sinensis var. sinensis Chr5 4 CH_camsi_685 2 2 0.000275128
Cannabis sativa NC_044373.1 4 CH_cansat_333 2 3 0.000590945
Coffea canephora chr2 4 CH_ccan_380 2 5 0.000638821
Cardamine hirsuta Chr7 4 CH_chi_288 2 2 0.000207361
Carya illinoinensis Chr15 4 CH_cil_460 2 2 0.000371897
Capsella rubella scaffold_7 4 CH_cru_271 2 2 0.000219346
Cucumis sativus L. chr3 4 CH_csa_49 4 4 0.00000000000872629
Daucus carota DCARv2_Chr4 4 CH_dca_140 3 3 0.000000512531
Erigeron canadensis Conyza_canadensis_scaffold:1 4 CH_eca_17 5 5 0.00000000000000170301
Eucalyptus grandis Chr10 4 CH_egr_763 2 2 0.000175582
Eutrema salsugineum scaffold_1 4 CH_esa_193 2 2 0.00022845
Gossypium hirsutum A01 4 CH_ghi_700 2 2 0.000961256
Gossypium hirsutum D01 4 CH_ghi_701 2 2 0.000961256
Gossypium hirsutum D02 4 CH_ghi_702 2 2 0.000961256
Gossypium raimondii Chr02 4 CH_gra_338 2 2 0.000536107
Gossypium raimondii Chr05 4 CH_gra_339 2 2 0.000536107
Magnolia biondii Chr06 4 CH_mbi_197 3 7 0.000000123821
Malus domestica Chr01 4 CH_mdo_543 2 2 0.000227527
Medicago truncatula chr7 4 CH_mtr_659 2 3 0.000369764
Olea europaea chr10 4 CH_oeu_288 2 2 0.000320273
Olea europaea chr18 4 CH_oeu_289 2 2 0.000320273
Oryza sativa ssp. japonica chr11 4 CH_osa_404 3 22 0.000359953
Petunia axillaris Peaxi162Scf00069 4 CH_pax_339 2 2 0.000703556
Punica granatum NC_045134.1 4 CH_pgr_175 3 4 0.00000118224
Pisum sativum chr1LG6 4 CH_psa_356 2 2 0.000521635
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_589 2 2 0.000119596
Rhododendron simsii chr09 4 CH_rsi_457 2 2 0.000387184
Salvia bowleyana GWHASIU00000003 4 CH_sbo_60 5 8 0.0000000000000107988
Sechium edule LG12 4 CH_sed_209 2 2 0.000214026
Sequoiadendron giganteum chr2 4 CH_sgi_251 5 12 0.000000000000200688
Schrenkiella parvula ch7-4 4 CH_spa_41 3 3 0.0000000371957
Theobroma cacao Chromosome_4 4 CH_tca_329 2 2 0.000219716
Tarenaya hassleriana NW_010966881.1 4 CH_tha_120 3 17 0.000173832
Tripterygium wilfordii NC_052252.1 4 CH_twi_281 2 2 0.000334728

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001