Functional clusters
Information
- Type Gene Ontology
- Description intramolecular lyase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_369 | 3 | CH_aag_91 | 4 | 11 | 0.0000299253 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 3 | CH_arhy_394 | 3 | 3 | 0.00000733546 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 3 | CH_arhy_478 | 3 | 5 | 0.000073303 |
| Corylus avellana | 2 | 3 | CH_cav_165 | 3 | 4 | 0.00000423146 |
| Fragaria x ananassa | Fvb2-4 | 3 | CH_fan_102 | 4 | 5 | 0.00000000440622 |
| Fragaria x ananassa | Fvb2-2 | 3 | CH_fan_404 | 3 | 8 | 0.00017191 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_126 | 4 | 11 | 0.0000000667063 |
| Glycine max | Gm03 | 3 | CH_gma_225 | 3 | 3 | 0.00000287412 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_350 | 3 | 3 | 0.00000377638 |
| Phaseolus vulgaris | Chr01 | 3 | CH_pvu_167 | 3 | 3 | 0.00000294754 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_462 | 3 | 9 | 0.0000240118 |
| Tripterygium wilfordii | NC_052248.1 | 3 | CH_twi_61 | 4 | 4 | 0.00000000159405 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_74 | 4 | 4 | 0.00000000438162 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_110 | 3 | 3 | 0.00000137779 |
| Vitis vinifera | chr7 | 3 | CH_vvi_180 | 3 | 3 | 0.00000104144 |
| Anthoceros agrestis | Sc2ySwM_369 | 4 | CH_aag_91 | 4 | 11 | 0.0000299253 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 4 | CH_arhy_394 | 3 | 3 | 0.00000733546 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 4 | CH_arhy_478 | 3 | 5 | 0.000073303 |
| Corylus avellana | 2 | 4 | CH_cav_165 | 3 | 4 | 0.00000423146 |
| Fragaria x ananassa | Fvb2-4 | 4 | CH_fan_102 | 4 | 5 | 0.00000000440622 |
| Fragaria x ananassa | Fvb2-2 | 4 | CH_fan_404 | 3 | 8 | 0.00017191 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_126 | 4 | 11 | 0.0000000667063 |
| Glycine max | Gm03 | 4 | CH_gma_225 | 3 | 3 | 0.00000287412 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_350 | 3 | 3 | 0.00000377638 |
| Phaseolus vulgaris | Chr01 | 4 | CH_pvu_167 | 3 | 3 | 0.00000294754 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_462 | 3 | 9 | 0.0000240118 |
| Tripterygium wilfordii | NC_052248.1 | 4 | CH_twi_61 | 4 | 4 | 0.00000000159405 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_74 | 4 | 4 | 0.00000000438162 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_110 | 3 | 3 | 0.00000137779 |
| Vitis vinifera | chr7 | 4 | CH_vvi_180 | 3 | 3 | 0.00000104144 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004512 | inositol-3-phosphate synthase activity | 10 |
| GO:0009905 | ent-copalyl diphosphate synthase activity | 10 |
| GO:0045430 | chalcone isomerase activity | 68 |
| GO:0047793 | cycloeucalenol cycloisomerase activity | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |