Functional clusters

Information

  • Type Gene Ontology
  • Description chalcone isomerase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 3 CH_ach_206 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_279 3 3 0.000000161337
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_280 3 3 0.000000161337
Amborella trichopoda AmTr_v1.0_scaffold00034 3 CH_atr_259 2 2 0.000238322
Brassica carinata ChrC07 3 CH_bca_829 2 2 0.000448905
Brassica carinata ChrB05 3 CH_bca_830 2 2 0.000448905
Brassica napus C08 3 CH_bna_610 2 2 0.000519726
Brassica oleracea C8 3 CH_bol_366 2 3 0.000588328
Brassica rapa A09 3 CH_bra_300 2 3 0.000772726
Camellia sinensis var. sinensis Chr7 3 CH_camsi_691 2 2 0.000275128
Camellia sinensis var. sinensis Chr7 3 CH_camsi_692 2 2 0.000275128
Cicer arietinum L. Ca_LG4_v3 3 CH_car_120 2 2 0.0000778301
Coffea canephora chr3 3 CH_ccan_286 2 8 0.000191648
Cardamine hirsuta Chr5 3 CH_chi_292 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_1529 3 CH_cqu_491 2 2 0.000473821
Chenopodium quinoa C_Quinoa_Scaffold_1373 3 CH_cqu_492 2 2 0.000473821
Eucalyptus grandis Chr10 3 CH_egr_765 2 2 0.000175582
Glycine max Gm20 3 CH_gma_121 3 3 0.00000000864398
Helianthus annuus HanXRQChr15 3 CH_han_203 3 4 0.00000000895963
Lotus japonicus chr5 3 CH_lja_32 4 4 0.00000000000109705
Malus domestica Chr07 3 CH_mdo_646 2 2 0.000568817
Malus domestica Chr01 3 CH_mdo_90 4 6 0.000000000036807
Medicago truncatula chr1 3 CH_mtr_43 6 8 5.16394e-19
Punica granatum NC_045134.1 3 CH_pgr_324 2 2 0.000225107
Pisum sativum chr6LG2 3 CH_psa_113 3 9 0.000000342805
Phaseolus vulgaris Chr07 3 CH_pvu_333 2 2 0.000440836
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_591 2 2 0.000119596
Simmondsia chinensis GWHAASQ00000006 3 CH_sci_166 2 2 0.0000851426
Solanum lycopersicum SL4.0ch05 3 CH_sly_361 2 2 0.0000586941
Solanum pennellii Spenn-ch05 3 CH_spe_282 2 2 0.000044479
Theobroma cacao Chromosome_10 3 CH_tca_160 3 7 0.000000281574
Trifolium pratense Tp57577_TGAC_v2_LG1 3 CH_tpr_333 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG6 3 CH_tpr_334 2 2 0.000454184
Vigna mungo CM024071.1 3 CH_vmu_52 3 3 0.00000000626267
Actinidia chinensis Lachesis_group3 4 CH_ach_206 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_279 3 3 0.000000161337
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_280 3 3 0.000000161337
Amborella trichopoda AmTr_v1.0_scaffold00034 4 CH_atr_259 2 2 0.000238322
Brassica carinata ChrC07 4 CH_bca_829 2 2 0.000448905
Brassica carinata ChrB05 4 CH_bca_830 2 2 0.000448905
Brassica napus C08 4 CH_bna_610 2 2 0.000519726
Brassica oleracea C8 4 CH_bol_366 2 3 0.000588328
Brassica rapa A09 4 CH_bra_300 2 3 0.000772726
Camellia sinensis var. sinensis Chr7 4 CH_camsi_691 2 2 0.000275128
Camellia sinensis var. sinensis Chr7 4 CH_camsi_692 2 2 0.000275128
Cicer arietinum L. Ca_LG4_v3 4 CH_car_120 2 2 0.0000778301
Coffea canephora chr3 4 CH_ccan_286 2 8 0.000191648
Cardamine hirsuta Chr5 4 CH_chi_292 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_1529 4 CH_cqu_491 2 2 0.000473821
Chenopodium quinoa C_Quinoa_Scaffold_1373 4 CH_cqu_492 2 2 0.000473821
Eucalyptus grandis Chr10 4 CH_egr_765 2 2 0.000175582
Glycine max Gm20 4 CH_gma_121 3 3 0.00000000864398
Helianthus annuus HanXRQChr15 4 CH_han_203 3 4 0.00000000895963
Lotus japonicus chr5 4 CH_lja_32 4 4 0.00000000000109705
Malus domestica Chr07 4 CH_mdo_646 2 2 0.000568817
Malus domestica Chr01 4 CH_mdo_90 4 6 0.000000000036807
Medicago truncatula chr1 4 CH_mtr_43 6 8 5.16394e-19
Punica granatum NC_045134.1 4 CH_pgr_324 2 2 0.000225107
Pisum sativum chr6LG2 4 CH_psa_113 3 9 0.000000342805
Phaseolus vulgaris Chr07 4 CH_pvu_333 2 2 0.000440836
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_591 2 2 0.000119596
Simmondsia chinensis GWHAASQ00000006 4 CH_sci_166 2 2 0.0000851426
Solanum lycopersicum SL4.0ch05 4 CH_sly_361 2 2 0.0000586941
Solanum pennellii Spenn-ch05 4 CH_spe_282 2 2 0.000044479
Theobroma cacao Chromosome_10 4 CH_tca_160 3 7 0.000000281574
Trifolium pratense Tp57577_TGAC_v2_LG1 4 CH_tpr_333 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG6 4 CH_tpr_334 2 2 0.000454184
Vigna mungo CM024071.1 4 CH_vmu_52 3 3 0.00000000626267

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001