Functional clusters
Information
- Type Gene Ontology
- Description peptidyl-prolyl cis-trans isomerase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group9 | 3 | CH_ach_189 | 3 | 3 | 0.000286932 |
| Brassica carinata | ChrC06 | 3 | CH_bca_784 | 3 | 3 | 0.000370323 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_250 | 3 | 4 | 0.000710336 |
| Camellia sinensis var. sinensis | Chr15 | 3 | CH_camsi_547 | 5 | 27 | 0.0000751863 |
| Capsicum annuum | PGAv.1.6.scaffold128 | 3 | CH_can_202 | 4 | 6 | 0.00000256303 |
| Davidia involucrata | GWHABJS00000010 | 3 | CH_din_135 | 4 | 4 | 0.00000045617 |
| Helianthus annuus | HanXRQChr08 | 3 | CH_han_550 | 3 | 3 | 0.000145202 |
| Medicago truncatula | chr8 | 3 | CH_mtr_341 | 4 | 5 | 0.000000796621 |
| Medicago truncatula | chr8 | 3 | CH_mtr_428 | 6 | 61 | 0.0000137468 |
| Pisum sativum | chr4LG4 | 3 | CH_psa_124 | 4 | 5 | 0.000000672655 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_302 | 5 | 15 | 0.000000770605 |
| Papaver somniferum | NC_039361.1 | 3 | CH_pso_86 | 9 | 44 | 0.000000000000346325 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_280 | 5 | 11 | 0.000000149994 |
| Schrenkiella parvula | ch3-2 | 3 | CH_spa_167 | 3 | 3 | 0.000243957 |
| Actinidia chinensis | Lachesis_group9 | 4 | CH_ach_189 | 3 | 3 | 0.000286932 |
| Brassica carinata | ChrC06 | 4 | CH_bca_784 | 3 | 3 | 0.000370323 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_250 | 3 | 4 | 0.000710336 |
| Camellia sinensis var. sinensis | Chr15 | 4 | CH_camsi_547 | 5 | 27 | 0.0000751863 |
| Capsicum annuum | PGAv.1.6.scaffold128 | 4 | CH_can_202 | 4 | 6 | 0.00000256303 |
| Davidia involucrata | GWHABJS00000010 | 4 | CH_din_135 | 4 | 4 | 0.00000045617 |
| Helianthus annuus | HanXRQChr08 | 4 | CH_han_550 | 3 | 3 | 0.000145202 |
| Medicago truncatula | chr8 | 4 | CH_mtr_341 | 4 | 5 | 0.000000796621 |
| Medicago truncatula | chr8 | 4 | CH_mtr_428 | 6 | 61 | 0.0000137468 |
| Pisum sativum | chr4LG4 | 4 | CH_psa_124 | 4 | 5 | 0.000000672655 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_302 | 5 | 15 | 0.000000770605 |
| Papaver somniferum | NC_039361.1 | 4 | CH_pso_86 | 9 | 44 | 0.000000000000346325 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_280 | 5 | 11 | 0.000000149994 |
| Schrenkiella parvula | ch3-2 | 4 | CH_spa_167 | 3 | 3 | 0.000243957 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |