Functional clusters

Information

  • Type MapMan
  • Description Clade-specific metabolism.Brassicaceae

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_549 7 80 0.0000247183
Brassica carinata ChrB06 2 CH_bca_549 7 80 0.0000247183

Available child term results

Ontology identifier Description Number of clusters
30.1.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis 4
30.1.1.10.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.flavin-containing monooxygenase 12
30.1.1.10.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.glucosinolate 2-oxoglutarate-dependent dioxygenase (AOP) 21
30.1.1.10.3 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.but-3-enyl hydroxylase 4
30.1.1.10.4 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.cytochrome P450 monooxygenase 22
30.1.1.10.5 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.benzoyl-CoA ligase (BZO1) 32
30.1.1.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate synthase 11
30.1.1.5.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.aliphatic core structure.oligohomomethionine N-hydroxylase 6
30.1.1.5.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.aliphatic core structure.aldoxime oxidase 4
30.1.1.6.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.phenylalanine N-monooxygenase 15
30.1.1.6.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.tryptophan N-monooxygenase 1
30.1.1.6.4 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.glutathione S-transferase 36
30.1.1.6.5 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.S-glycosyl transferase 2
30.1.1.7 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.gamma-glutamyl peptidase 4
30.1.1.9 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.sulfotransferase 25
30.1.2.1 Clade-specific metabolism.Brassicaceae.glucosinolate degradation.myrosinase 15
30.1.2.2 Clade-specific metabolism.Brassicaceae.glucosinolate degradation.nitrilespecifier protein 12
30.1.2.3 Clade-specific metabolism.Brassicaceae.glucosinolate degradation.epithiospecifier protein (ESP) 2
30.1.2.4 Clade-specific metabolism.Brassicaceae.glucosinolate degradation.epithiospecifier modifier protein (ESM) 5
30.1.2.5 Clade-specific metabolism.Brassicaceae.glucosinolate degradation.nitrilase 46

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001