Functional clusters

Information

  • Type MapMan
  • Description Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.sulfotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 1 CH_aar_216 2 2 0.000273698
Arabidopsis lyrata scaffold_2 1 CH_aly_381 2 2 0.000396027
Arabidopsis thaliana Chr1 1 CH_ath_276 2 2 0.0000859476
Brassica carinata ChrC05 1 CH_bca_371 3 3 0.00000138732
Brassica carinata ChrB03 1 CH_bca_581 3 7 0.0000485214
Brassica carinata ChrC04 1 CH_bca_652 3 8 0.0000776204
Brassica carinata ChrC08 1 CH_bca_66 6 36 0.0000000000262477
Brassica napus C06 1 CH_bna_158 4 8 0.0000000169501
Brassica napus A07 1 CH_bna_329 3 4 0.00000474866
Brassica napus C09 1 CH_bna_442 3 7 0.0000415305
Brassica oleracea C6 1 CH_bol_111 3 3 0.000000192312
Capsella rubella scaffold_2 1 CH_cru_297 3 14 0.000163149
Eutrema salsugineum scaffold_9 1 CH_esa_333 2 2 0.000761499
Tarenaya hassleriana NW_010965372.1 1 CH_tha_155 2 2 0.000209541
Aethionema arabicum LG-4 2 CH_aar_216 2 2 0.000273698
Arabidopsis lyrata scaffold_2 2 CH_aly_381 2 2 0.000396027
Arabidopsis thaliana Chr1 2 CH_ath_276 2 2 0.0000859476
Brassica carinata ChrC05 2 CH_bca_371 3 3 0.00000138732
Brassica carinata ChrB03 2 CH_bca_581 3 7 0.0000485214
Brassica carinata ChrC04 2 CH_bca_652 3 8 0.0000776204
Brassica carinata ChrC08 2 CH_bca_66 6 36 0.0000000000262477
Brassica oleracea C6 2 CH_bol_111 3 3 0.000000192312
Capsella rubella scaffold_2 2 CH_cru_297 3 14 0.000163149
Eutrema salsugineum scaffold_9 2 CH_esa_333 2 2 0.000761499
Tarenaya hassleriana NW_010965372.1 2 CH_tha_155 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001