Functional clusters

Information

  • Type MapMan
  • Description Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_78 3 3 0.00000000653509
Brassica carinata ChrC03 1 CH_bca_1014 2 2 0.00059854
Brassica napus C07 1 CH_bna_228 3 4 0.000000340698
Brassica oleracea C7 1 CH_bol_312 2 2 0.000196117
Capsella rubella scaffold_6 1 CH_cru_117 3 3 0.0000000320764
Eutrema salsugineum scaffold_6 1 CH_esa_190 2 2 0.0000761499
Arabidopsis lyrata scaffold_6 2 CH_aly_78 3 3 0.00000000653509
Brassica carinata ChrC03 2 CH_bca_1014 2 2 0.00059854
Brassica oleracea C7 2 CH_bol_312 2 2 0.000196117
Capsella rubella scaffold_6 2 CH_cru_117 3 3 0.0000000320764
Eutrema salsugineum scaffold_6 2 CH_esa_190 2 2 0.0000761499

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001