Functional clusters

Information

  • Type MapMan
  • Description Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.benzoyl-CoA ligase (BZO1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_251 3 75 0.0000830498
Capsicum annuum PGAv.1.6.scaffold1681 1 CH_can_321 2 3 0.000247821
Capsella rubella scaffold_2 1 CH_cru_26 5 7 0.00000000000000450174
Fragaria x ananassa Fvb1-4 1 CH_fan_590 2 2 0.00066613
Fragaria x ananassa Fvb1-1 1 CH_fan_591 2 2 0.00066613
Fragaria x ananassa Fvb1-1 1 CH_fan_592 2 2 0.00066613
Fragaria vesca Fvb1 1 CH_fve_270 2 2 0.0000589102
Helianthus annuus HanXRQChr16 1 CH_han_642 2 2 0.000386429
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_259 3 12 0.00000348616
Populus trichocarpa Chr06 1 CH_ptr_543 2 2 0.000867002
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_481 2 2 0.0000398653
Salix brachista GWHAAZH00000017 1 CH_sbr_407 3 36 0.000847693
Schrenkiella parvula ch5-5 1 CH_spa_282 2 5 0.000787247
Solanum pennellii Spenn-ch02 1 CH_spe_103 3 3 0.00000000296764
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_246 2 2 0.0000929238
Arabidopsis thaliana Chr1 2 CH_ath_251 3 75 0.0000830498
Capsicum annuum PGAv.1.6.scaffold1681 2 CH_can_321 2 3 0.000247821
Capsella rubella scaffold_2 2 CH_cru_26 5 7 0.00000000000000450174
Eucalyptus grandis Chr06 2 CH_egr_376 4 31 0.0000000189113
Fragaria x ananassa Fvb1-4 2 CH_fan_590 2 2 0.00066613
Fragaria x ananassa Fvb1-1 2 CH_fan_591 2 2 0.00066613
Fragaria x ananassa Fvb1-1 2 CH_fan_592 2 2 0.00066613
Fragaria vesca Fvb1 2 CH_fve_270 2 2 0.0000589102
Helianthus annuus HanXRQChr16 2 CH_han_642 2 2 0.000386429
Lotus japonicus chr6 2 CH_lja_269 2 2 0.0000715077
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_259 3 12 0.00000348616
Populus trichocarpa Chr06 2 CH_ptr_543 2 2 0.000867002
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_481 2 2 0.0000398653
Salix brachista GWHAAZH00000017 2 CH_sbr_407 3 36 0.000847693
Schrenkiella parvula ch5-5 2 CH_spa_282 2 5 0.000787247
Solanum pennellii Spenn-ch02 2 CH_spe_103 3 3 0.00000000296764
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_246 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001