Functional clusters
Information
- Type MapMan
- Description Clade-specific metabolism.Brassicaceae.glucosinolate degradation.myrosinase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB04 | 1 | CH_bca_29 | 5 | 5 | 0.0000000000000412426 |
| Brassica napus | C02 | 1 | CH_bna_165 | 4 | 9 | 0.0000000256253 |
| Brassica napus | A09 | 1 | CH_bna_277 | 3 | 3 | 0.00000104487 |
| Brassica napus | C09 | 1 | CH_bna_327 | 3 | 4 | 0.00000417885 |
| Brassica oleracea | C9 | 1 | CH_bol_139 | 3 | 3 | 0.000000897457 |
| Brassica rapa | A02 | 1 | CH_bra_180 | 3 | 5 | 0.0000225482 |
| Brassica rapa | A08 | 1 | CH_bra_299 | 3 | 11 | 0.000371458 |
| Eutrema salsugineum | scaffold_7 | 1 | CH_esa_264 | 4 | 62 | 0.000240364 |
| Tarenaya hassleriana | NW_010968505.1 | 1 | CH_tha_58 | 3 | 3 | 0.000000256136 |
| Brassica carinata | ChrB04 | 2 | CH_bca_29 | 5 | 5 | 0.0000000000000412426 |
| Brassica oleracea | C9 | 2 | CH_bol_139 | 3 | 3 | 0.000000897457 |
| Brassica rapa | A02 | 2 | CH_bra_180 | 3 | 5 | 0.0000225482 |
| Brassica rapa | A08 | 2 | CH_bra_299 | 3 | 11 | 0.000371458 |
| Eutrema salsugineum | scaffold_7 | 2 | CH_esa_264 | 4 | 62 | 0.000240364 |
| Tarenaya hassleriana | NW_010968505.1 | 2 | CH_tha_58 | 3 | 3 | 0.000000256136 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |