Functional clusters

Information

  • Type MapMan
  • Description Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.secondary modifications.cytochrome P450 monooxygenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 1 CH_aar_157 2 2 0.0000912326
Arabidopsis thaliana Chr4 1 CH_ath_148 3 7 0.00000027575
Brassica carinata ChrC01 1 CH_bca_302 3 4 0.000000328987
Brassica napus C01 1 CH_bna_101 4 6 0.000000000878992
Brassica napus A01 1 CH_bna_328 3 5 0.00000421158
Brassica oleracea C3 1 CH_bol_245 3 12 0.0000422698
Brassica oleracea C1 1 CH_bol_46 4 6 0.000000000329961
Brassica rapa A01 1 CH_bra_49 4 5 0.000000000149543
Cardamine hirsuta Chr7 1 CH_chi_135 3 4 0.000000286643
Capsella rubella scaffold_7 1 CH_cru_107 3 4 0.0000000320752
Eutrema salsugineum scaffold_1 1 CH_esa_45 4 5 0.0000000000331199
Schrenkiella parvula ch7-6 1 CH_spa_106 3 4 0.00000037192
Aethionema arabicum LG-6 2 CH_aar_157 2 2 0.0000912326
Arabidopsis thaliana Chr4 2 CH_ath_148 3 7 0.00000027575
Brassica carinata ChrC01 2 CH_bca_302 3 4 0.000000328987
Brassica oleracea C3 2 CH_bol_245 3 12 0.0000422698
Brassica oleracea C1 2 CH_bol_46 4 6 0.000000000329961
Brassica rapa A01 2 CH_bra_49 4 5 0.000000000149543
Cardamine hirsuta Chr7 2 CH_chi_135 3 4 0.000000286643
Capsella rubella scaffold_7 2 CH_cru_107 3 4 0.0000000320752
Eutrema salsugineum scaffold_1 2 CH_esa_45 4 5 0.0000000000331199
Schrenkiella parvula ch7-6 2 CH_spa_106 3 4 0.00000037192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001