Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p13130 Brassica napus
Aa31LG6G120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis
Actinidia02146 Actinidia chinensis
Ah.12g054200 Amaranthus hybridus
AL7G37330 Arabidopsis lyrata
Aqoxy7G00819 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea
AT4G17380 Arabidopsis thaliana
ATR0057G027 Amborella trichopoda
Atru.chr9.1288 Acer truncatum
AUR62007105 Chenopodium quinoa
AUR62019968 Chenopodium quinoa
BcaB04g18410 Brassica carinata
BcaC07g38064 Brassica carinata
BcaC07g38067 Brassica carinata
BolC8t48465H Brassica oleracea
BolC8t48469H Brassica oleracea
BraA08t33293Z Brassica rapa
CAN.G1227.20 Capsicum annuum
CANSAT21G2208 Cannabis sativa
CARHR223990 Cardamine hirsuta
Carub.0007s2403 Capsella rubella
Ca_24591_v3 Cicer arietinum L.
CBR_g547 Chara braunii
Cc08_g12230 Coffea canephora
CDE04G2441 Ceratophyllum demersum
Cfa026892 Carpinus fangiana
Ciclev10018920m.g Citrus clementina
CiPaw.11G081300 Carya illinoinensis
ClCG01G004190 Citrullus lanatus
COL.COLO4_37144 Corchorus olitorius
Cpa.g.c39922 Carica papaya
Cpa.g.sc29.180 Carica papaya
Cpa.g.sc29.182 Carica papaya
Cpa.g.sc29.183 Carica papaya
Cpa.g.sc29.185 Carica papaya
Cre16.g692550 Chlamydomonas reinhardtii
CsaV3_5G004390 Cucumis sativus L.
CSS0014382 Camellia sinensis var. sinensis
DCAR_006840 Daucus carota
Dinv21648 Davidia involucrata
Duzib068G0290 Durio zibethinus
ECA248G1640 Erigeron canadensis
EL10Ac5g12365 Beta vulgaris
Eucgr.E00409 Eucalyptus grandis
FAN04G3230 Fragaria x ananassa
FAN08G0299 Fragaria x ananassa
FAN13G1102 Fragaria x ananassa
FAN13G2137 Fragaria x ananassa
FAN18G0162 Fragaria x ananassa
FvH4_5g19230 Fragaria vesca
Glyma.11G034600 Glycine max
Gohir.A12G215766 Gossypium hirsutum
Gohir.A12G215866 Gossypium hirsutum
Gohir.A12G215932 Gossypium hirsutum
Gohir.D12G218466 Gossypium hirsutum
Gohir.D12G218532 Gossypium hirsutum
Gorai.008G234100 Gossypium raimondii
GSVIVG01004726001 Vitis vinifera
GSVIVG01004727001 Vitis vinifera
GSVIVG01007407001 Vitis vinifera
HanXRQChr06g0164431 Helianthus annuus
Haze_16325 Corylus avellana
Haze_16327 Corylus avellana
Haze_16328 Corylus avellana
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla
HPP92_025386 Vanilla planifolia
Hund11605 Selenicereus undatus
Hund11606 Selenicereus undatus
Lalb_Chr16g0379491 Lupinus albus
Lalb_Chr16g0379501 Lupinus albus
Lalb_Chr16g0379511 Lupinus albus
Lj2A221T32 Lonicera japonica
Lj2C221G5 Lonicera japonica
Lj2g0021636 Lotus japonicus
Lsat_1_v5_gn_3_1200 Lactuca sativa
Manes.01G082400 Manihot esculenta
Mapoly0001s0167 Marchantia polymorpha
MBI04_g09523_MAGBIO Magnolia biondii
MCO13G611 Micromonas commoda
MD04G1062200 Malus domestica
Medtr5g012900 Medicago truncatula
MELO3C005519.2 Cucumis melo
Migut.A01122 Erythranthe guttata
MSTRG.12114 Avicennia marina
MSTRG.12115 Avicennia marina
Nitab4.5_0000712g0130 Nicotiana tabacum
Nitab4.5_0002225g0010 Nicotiana tabacum
Nn1g05728 Nelumbo nucifera
Nn1g05737 Nelumbo nucifera
Nn2g12866 Nelumbo nucifera
Nn6g33903 Nelumbo nucifera
Oeu002583.1 Olea europaea
Os07g0486000 Oryza sativa ssp. japonica
Peaxi162Scf00102g01071 Petunia axillaris
PGR042G2104 Punica granatum
PGSC0003DMG400012503 Solanum tuberosum
Phvul.002G057100 Phaseolus vulgaris
Potri.001G156200 Populus trichocarpa
Potri.003G078601 Populus trichocarpa
Pp3c2_940 Physcomitrium patens
PRCOL_00003604 Prasinoderma coloniale
Prupe.5G066100 Prunus persica
Psat2g176640 Pisum sativum
PSO063G2362 Papaver somniferum
PSO782G0795 Papaver somniferum
QL12p011636 Quercus lobata
RcHm_v2.0_Chr7g0203731 Rosa chinensis
Rhsim11G0009700 Rhododendron simsii
Sabra01G0134700 Salix brachista
SalBow6G3355 Salvia bowleyana
Sc22g0000960 Simmondsia chinensis
Sed0012504 Sechium edule
SEGI_10627 Sequoiadendron giganteum
SEGI_10856 Sequoiadendron giganteum
SEGI_18944 Sequoiadendron giganteum
SEGI_25288 Sequoiadendron giganteum
SEGI_35945 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30171 Striga asiatica
SHI20465 Sapria himalayana
SHI47845 Sapria himalayana
SHI48176 Sapria himalayana
SMO340G0170 Selaginella moellendorffii
Solyc08g007330.3 Solanum lycopersicum
Sopen08g003270 Solanum pennellii
TAR375G0818 Trochodendron aralioides
THA.LOC104812808 Tarenaya hassleriana
Thecc.03G248800 Theobroma cacao
Thhalv10024454m.g Eutrema salsugineum
TPR.G18117 Trifolium pratense
TWI15G1253 Tripterygium wilfordii
unitig_744.g24474 Utricularia gibba
unitig_744.g24475 Utricularia gibba
vmacro00189 Vaccinium macrocarpon
VMungo1215G0570 Vigna mungo
Zm00001eb105070 Zea mays

User provided reference genes

Program Settings