Gene: Gohir.A12G215866

General Information

Structural Information

  • Species Gossypium hirsutum
  • Gene Identifier Gohir.A12G215866
  • Transcript Identifier Gohir.A12G215866.1
  • Gene Type Coding gene
  • Location A12 : 103514750-103517612 : negative

Gene Family Information

  • ID HOM05D005550
  • #Genes/#Species 138/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Gohir.A12G215866.v2.1
  • pacid 42440883

Descriptions

  • Description K08740 - DNA mismatch repair protein MSH4 (MSH4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0045143
ISO
PLAZA Integrative Orthologyhomologous chromosome segregation AT4G17380
GO:0010777
ISO
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination AT4G17380
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT4G17380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043073
ISO
PLAZA Integrative Orthologygerm cell nucleus AT4G17380
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G17380
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT4G17380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045076 DNA mismatch repair MutS family
Mapman id Description
13.3.5.5.1.2.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH4