Gene: ATR0057G027

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0057G027
  • Transcript Identifier ATR0057G027.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00111 : 65319-88594 : positive

Gene Family Information

  • ID HOM05D005550
  • #Genes/#Species 138/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00111.4.v1.0
  • pacid 31573558

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0045143
ISO
PLAZA Integrative Orthologyhomologous chromosome segregation AT4G17380
GO:0010777
ISO
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination AT4G17380
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT4G17380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043073
ISO
PLAZA Integrative Orthologygerm cell nucleus AT4G17380
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G17380
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT4G17380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007861 DNA mismatch repair protein MutS, clamp
IPR007696 DNA mismatch repair protein MutS, core
IPR045076 DNA mismatch repair MutS family
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR011184 DNA mismatch repair Msh2-type
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
13.3.5.5.1.2.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH4