Gene: DCAR_006840
General Information
Structural Information
- Species Daucus carota
- Gene Identifier DCAR_006840
- Transcript Identifier DCAR_006840
- Gene Type Coding gene
- Location DCARv2_Chr2 : 29064206-29076267 : positive
Gene Family Information
- ID HOM05D005550
- #Genes/#Species 138/97
- Phylogenetic origin
- ID ORTHO05D006679
- #Genes/#Species 139/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 36065874
- id DCAR_006840.v1.0
- uniprot A0A162AU89
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | GOA Database | mismatch repair | |
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0045143 | IEA | GOA Database | homologous chromosome segregation | |
| GO:0010777 | IEA | GOA Database | meiotic mismatch repair involved in reciprocal meiotic recombination | |
| GO:0007129 | IEA | GOA Database | homologous chromosome pairing at meiosis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | GOA Database | mismatched DNA binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0000794 | IEA | GOA Database | condensed nuclear chromosome | |
| GO:0043073 | IEA | GOA Database | germ cell nucleus | |
| GO:0009506 | IEA | GOA Database | plasmodesma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036187 | DNA mismatch repair protein MutS, core domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR045076 | DNA mismatch repair MutS family |
| IPR011184 | DNA mismatch repair Msh2-type |
| IPR000432 | DNA mismatch repair protein MutS, C-terminal |
| IPR007696 | DNA mismatch repair protein MutS, core |
| IPR007861 | DNA mismatch repair protein MutS, clamp |
| Mapman id | Description |
|---|---|
| 13.3.5.5.1.2.1 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH4 |