Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p04960 Brassica napus
Aa31LG8G13380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis
Actinidia12976 Actinidia chinensis
Ah.01g006750 Amaranthus hybridus
AL3G47590 Arabidopsis lyrata
Aqoxy3G03484 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea
AT2G15820 Arabidopsis thaliana
ATR0665G475 Amborella trichopoda
Atru.BG.82.p Acer truncatum
Atru.chr5.2820 Acer truncatum
Atru.chr5.2823 Acer truncatum
Atru.chr5.2826 Acer truncatum
Atru.chr5.2881 Acer truncatum
Atru.chr5.2882 Acer truncatum
Atru.chr5.2887 Acer truncatum
AUR62011424 Chenopodium quinoa
AUR62016636 Chenopodium quinoa
BcaB03g16332 Brassica carinata
BcaC06g36090 Brassica carinata
BolC7t41212H Brassica oleracea
BraA07t28289Z Brassica rapa
C07p07940 Brassica napus
CAN.G644.34 Capsicum annuum
CANSAT25G2181 Cannabis sativa
CARHR106180 Cardamine hirsuta
Carub.0003s2972 Capsella rubella
Ca_13480_v3 Cicer arietinum L.
CBR_g19584 Chara braunii
CBR_g8924 Chara braunii
Cc02_g18430 Coffea canephora
Cc02_g18440 Coffea canephora
CDE04G1903 Ceratophyllum demersum
CDE07G2018 Ceratophyllum demersum
Cfa005424 Carpinus fangiana
Ciclev10027854m.g Citrus clementina
CiPaw.05G055300 Carya illinoinensis
ClCG07G001810 Citrullus lanatus
COL.COLO4_11724 Corchorus olitorius
Cpa.g.sc62.53 Carica papaya
CsaV3_3G028800 Cucumis sativus L.
CSS0025307 Camellia sinensis var. sinensis
CSS0048591 Camellia sinensis var. sinensis
DCAR_003623 Daucus carota
DCAR_016664 Daucus carota
Dinv23594 Davidia involucrata
Dinv42121 Davidia involucrata
Duzib248G0151 Durio zibethinus
ECA234G4125 Erigeron canadensis
EL10Ac9g21818 Beta vulgaris
Eucgr.G01504 Eucalyptus grandis
Eucgr.L00820 Eucalyptus grandis
Eucgr.L01320 Eucalyptus grandis
FAN15G2181 Fragaria x ananassa
FAN20G2787 Fragaria x ananassa
FAN24G2628 Fragaria x ananassa
FAN27G0179 Fragaria x ananassa
FvH4_2g06900 Fragaria vesca
Glyma.07G178800 Glycine max
Glyma.20G009700 Glycine max
Gohir.A01G005900 Gossypium hirsutum
Gohir.D01G006000 Gossypium hirsutum
Gorai.002G007000 Gossypium raimondii
GSVIVG01031785001 Vitis vinifera
HanXRQChr10g0303221 Helianthus annuus
Haze_01881 Corylus avellana
HPP92_022045 Vanilla planifolia
Hund00318 Selenicereus undatus
Lalb_Chr10g0095451 Lupinus albus
Lj2g0010354 Lotus japonicus
Lj5P206T15 Lonicera japonica
Lsat_1_v5_gn_5_113460 Lactuca sativa
Manes.17G094600 Manihot esculenta
Mapoly0036s0055 Marchantia polymorpha
MD10G1089000 Malus domestica
Medtr0381s0010 Medicago truncatula
Medtr1g026035 Medicago truncatula
MELO3C026699.2 Cucumis melo
Migut.B00306 Erythranthe guttata
MSTRG.20134 Avicennia marina
Nitab4.5_0001453g0090 Nicotiana tabacum
Nitab4.5_0007303g0010 Nicotiana tabacum
Nn4g23272 Nelumbo nucifera
Oeu057674.1 Olea europaea
Os02g0702000 Oryza sativa ssp. japonica
Peaxi162Scf00789g00530 Petunia axillaris
PGR042G1055 Punica granatum
PGSC0003DMG400026525 Solanum tuberosum
Phvul.002G308800 Phaseolus vulgaris
Potri.009G106800 Populus trichocarpa
Pp3c16_23700 Physcomitrium patens
Pp3c25_10050 Physcomitrium patens
Prupe.8G116000 Prunus persica
Psat6g001360 Pisum sativum
QL11p038411 Quercus lobata
QL11p038477 Quercus lobata
QL11p038542 Quercus lobata
RcHm_v2.0_Chr1g0376021 Rosa chinensis
RcHm_v2.0_Chr2g0152801 Rosa chinensis
RcHm_v2.0_Chr6g0259211 Rosa chinensis
RcHm_v2.0_Chr6g0302241 Rosa chinensis
Rhsim11G0169300 Rhododendron simsii
Sabra09G0081600 Salix brachista
Sc08g0000140 Simmondsia chinensis
Sed0004701 Sechium edule
SEGI_31419 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20604 Striga asiatica
SMO356G0628 Selaginella moellendorffii
Solyc11g066850.3 Solanum lycopersicum
Sopen11g026560 Solanum pennellii
Sp3g29130 Schrenkiella parvula
TAR371G0058 Trochodendron aralioides
TAR371G0476 Trochodendron aralioides
TAR371G0992 Trochodendron aralioides
TAR629G1168 Trochodendron aralioides
TAR629G1760 Trochodendron aralioides
THA.LOC104807348 Tarenaya hassleriana
Thecc.02G095400 Theobroma cacao
Thhalv10022548m.g Eutrema salsugineum
TPR.G26422 Trifolium pratense
TWI31G0609 Tripterygium wilfordii
TWI79G0519 Tripterygium wilfordii
unitig_744.g24241 Utricularia gibba
vmacro02172 Vaccinium macrocarpon
VMungo0464G0688 Vigna mungo
Zm00001eb251880 Zea mays

User provided reference genes

Program Settings