Gene: Solyc11g066850.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g066850.3
  • Transcript Identifier Solyc11g066850.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 50681662-50685525 : positive

Gene Family Information

  • ID HOM05D006129
  • #Genes/#Species 129/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g066850.3.1
  • uniprot A0A3Q7JP38
  • gene_id Solyc11g066850

Descriptions

  • Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VQ41_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0045292
IBA
GOA DatabasemRNA cis splicing, via spliceosome
GO:0048564
IBA
GOA Databasephotosystem I assembly
GO:0000373
IBA
GOA DatabaseGroup II intron splicing
GO:0006388
ISO
PLAZA Integrative OrthologytRNA splicing, via endonucleolytic cleavage and ligation AT2G15820
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027434 Homing endonuclease
IPR004860 Homing endonuclease, LAGLIDADG
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.4.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51)