Gene: TPR.G26422

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G26422
  • Transcript Identifier TPR.T27328
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG1 : 22985774-22988374 : negative

Gene Family Information

  • ID HOM05D006129
  • #Genes/#Species 129/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA27328.v2
  • id Tp57577_TGAC_v2_gene26422.v2
  • pacid 35978156
  • uniprot A0A2K3MPY6

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing AT2G15820
GO:0045292
ISO
PLAZA Integrative OrthologymRNA cis splicing, via spliceosome Os02g0702000
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT2G15820
GO:0006388
ISO
PLAZA Integrative OrthologytRNA splicing, via endonucleolytic cleavage and ligation AT2G15820
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027434 Homing endonuclease
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR004860 Homing endonuclease, LAGLIDADG
Mapman id Description
16.11.4.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51)