Gene: Potri.009G106800

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.009G106800
  • Transcript Identifier Potri.009G106800.1
  • Gene Type Coding gene
  • Location Chr09 : 9303051-9305826 : negative

Gene Family Information

  • ID HOM05D006129
  • #Genes/#Species 129/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.009G106800.v4.1
  • pacid 42772520
  • synonym POPTR_0009s11000

Descriptions

  • Description PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing AT2G15820
GO:0045292
ISO
PLAZA Integrative OrthologymRNA cis splicing, via spliceosome Os02g0702000
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT2G15820
GO:0006388
ISO
PLAZA Integrative OrthologytRNA splicing, via endonucleolytic cleavage and ligation AT2G15820
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004519
IEA
InterProendonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR027434 Homing endonuclease
IPR002885 Pentatricopeptide repeat
IPR004860 Homing endonuclease, LAGLIDADG
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
16.11.4.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51)