Gene: Pp3c25_10050

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c25_10050
  • Transcript Identifier Pp3c25_10050V3.3
  • Gene Type Coding gene
  • Location Chr25 : 7240787-7244671 : negative

Gene Family Information

  • ID HOM05D006129
  • #Genes/#Species 129/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c25_10050V3.3
  • pacid 32979726
  • alias Phypa_41119
  • alias Pp1s168_101V6
  • uniprot A0A2K1IEE7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0045292
IBA
GOA DatabasemRNA cis splicing, via spliceosome
GO:0048564
IBA
GOA Databasephotosystem I assembly
GO:0000373
IBA
GOA DatabaseGroup II intron splicing
GO:0006388
ISO
PLAZA Integrative OrthologytRNA splicing, via endonucleolytic cleavage and ligation AT2G15820
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027434 Homing endonuclease
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR004860 Homing endonuclease, LAGLIDADG
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.4.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51)