Gene: Zm00001eb251880

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb251880
  • Transcript Identifier Zm00001eb251880_T001
  • Gene Type Coding gene
  • Location 5 : 208492257-208495495 : positive

Gene Family Information

  • ID HOM05D006129
  • #Genes/#Species 129/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb251880_T001
  • pid Zm00001eb251880_P001
  • uniprot A0A1D6HH84
  • uniprot A0A3L6EIY5
  • refseq XP_008646124.1
  • refseq XM_008647902.1
  • V4_identifier Zm00001d017751

Descriptions

  • Description Zm00001e015566
  • Description Pentatricopeptide repeat-containing protein chloroplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000373
IBA
IEA
GOA DatabaseGroup II intron splicing
GO:0048564
IBA
IEA
GOA Databasephotosystem I assembly
GO:0045292
IBA
IEA
GOA DatabasemRNA cis splicing, via spliceosome
GO:0006388
ISO
PLAZA Integrative OrthologytRNA splicing, via endonucleolytic cleavage and ligation AT2G15820
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G15820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027434 Homing endonuclease
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR004860 Homing endonuclease, LAGLIDADG
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.4.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51)