Gene: Cc02_g18440
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g18440
- Transcript Identifier Cc02_g18440.1
- Gene Type Coding gene
- Location chr2 : 16759565-16760968 : positive
Gene Family Information
- ID HOM05D006129
- #Genes/#Species 129/92
- Phylogenetic origin
- ID ORTHO05D007446
- #Genes/#Species 130/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB Q9XIL5
- UniProtKB B9S769
- UniProtKB D7TPM6
- UniProtKB B9HRW2
- id GSCOCG00014388001
Descriptions
- Description Pentatricopeptide repeat-containing protein At2g15820
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | AT2G15820 |
| GO:0045292 | ISO | PLAZA Integrative Orthology | mRNA cis splicing, via spliceosome | Os02g0702000 |
| GO:0048564 | ISO | PLAZA Integrative Orthology | photosystem I assembly | AT2G15820 |
| GO:0006388 | ISO | PLAZA Integrative Orthology | tRNA splicing, via endonucleolytic cleavage and ligation | AT2G15820 |
| GO:0010239 | ISO | PLAZA Integrative Orthology | chloroplast mRNA processing | AT2G15820 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004519 | IEA | InterPro | endonuclease activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.4.1.4 | RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP51) |