Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17630 Brassica napus
A09p67250 Brassica napus
Aa31LG5G5430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.679 Anthoceros agrestis
Actinidia39855 Actinidia chinensis
Ah.13g072910 Amaranthus hybridus
AL1G15860 Arabidopsis lyrata
AL4G26720 Arabidopsis lyrata
Aqoxy7G00191 Aquilegia oxysepala
Aqoxy7G00192 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.98UW30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJKM5C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZ0ARL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z962T9 Arachis hypogaea
AT1G05900 Arabidopsis thaliana
AT2G31450 Arabidopsis thaliana
ATR0686G198 Amborella trichopoda
Atru.chr3.1530 Acer truncatum
Atru.chr3.1531 Acer truncatum
Atru.chr3.1534 Acer truncatum
AUR62002292 Chenopodium quinoa
AUR62015399 Chenopodium quinoa
BcaB01g04044 Brassica carinata
BcaC01g05950 Brassica carinata
BcaC01g05951 Brassica carinata
BcaC07g42101 Brassica carinata
BcaC07g42102 Brassica carinata
BolC3t14451H Brassica oleracea
BolC8t52682H Brassica oleracea
BraA03t11028Z Brassica rapa
BraA09t42058Z Brassica rapa
C03p20720 Brassica napus
C08p51540 Brassica napus
CAN.G1292.3 Capsicum annuum
CAN.G541.14 Capsicum annuum
CAN.G65.181 Capsicum annuum
CAN.G749.19 Capsicum annuum
CAN.G80.26 Capsicum annuum
CANSAT78G2120 Cannabis sativa
CARHR005460 Cardamine hirsuta
CARHR125100 Cardamine hirsuta
Carub.0001s0527 Capsella rubella
Carub.0004s1278 Capsella rubella
Ca_01263_v3 Cicer arietinum L.
Ca_18838_v3 Cicer arietinum L.
Ca_20780_v3 Cicer arietinum L.
Ca_29315_v3 Cicer arietinum L.
CBR_g29622 Chara braunii
Cc00_g17220 Coffea canephora
Cfa015153 Carpinus fangiana
Cfa026201 Carpinus fangiana
Ciclev10020813m.g Citrus clementina
Ciclev10020816m.g Citrus clementina
CiPaw.02G055200 Carya illinoinensis
ClCG07G015600 Citrullus lanatus
COL.COLO4_02723 Corchorus olitorius
Cpa.g.sc41.25 Carica papaya
Cpa.g.sc41.31 Carica papaya
Cre17.g732050 Chlamydomonas reinhardtii
CsaV3_4G003300 Cucumis sativus L.
CSS0013619 Camellia sinensis var. sinensis
DCAR_028139 Daucus carota
DCAR_028143 Daucus carota
Dinv22724 Davidia involucrata
Duzib151G0384 Durio zibethinus
ECA236G1172 Erigeron canadensis
ECA236G3148 Erigeron canadensis
EL10Ac3g05922 Beta vulgaris
Eucgr.H00376 Eucalyptus grandis
FAN07G2248 Fragaria x ananassa
FAN12G1706 Fragaria x ananassa
FAN12G4165 Fragaria x ananassa
FvH4_4g10690 Fragaria vesca
Glyma.11G128600 Glycine max
Glyma.12G053100 Glycine max
Glyma.13G343700 Glycine max
Glyma.15G030650 Glycine max
Gohir.A10G133700 Gossypium hirsutum
Gohir.D08G144100 Gossypium hirsutum
Gohir.D10G133000 Gossypium hirsutum
Gorai.011G146700 Gossypium raimondii
GSVIVG01010748001 Vitis vinifera
HanXRQChr06g0172341 Helianthus annuus
Haze_01519 Corylus avellana
Haze_01520 Corylus avellana
Haze_27447 Corylus avellana
Hund03151 Selenicereus undatus
Hund03152 Selenicereus undatus
Lalb_Chr01g0003211 Lupinus albus
Lj3A203T17 Lonicera japonica
Lj3g0009399 Lotus japonicus
Lj3g0017360 Lotus japonicus
Lsat_1_v5_gn_8_80540 Lactuca sativa
Manes.04G041200 Manihot esculenta
Mapoly0058s0064 Marchantia polymorpha
Mapoly0058s0067 Marchantia polymorpha
Mapoly0058s0068 Marchantia polymorpha
MD04G1007400 Malus domestica
Medtr2g098660 Medicago truncatula
Medtr4g067060 Medicago truncatula
MELO3C017721.2 Cucumis melo
Migut.M00111 Erythranthe guttata
MSTRG.6615 Avicennia marina
Nitab4.5_0000941g0030 Nicotiana tabacum
Nitab4.5_0001787g0060 Nicotiana tabacum
Nitab4.5_0003132g0140 Nicotiana tabacum
Nitab4.5_0005570g0020 Nicotiana tabacum
Nn1g09578 Nelumbo nucifera
Oeu007466.1 Olea europaea
Os11g0267300 Oryza sativa ssp. japonica
Peaxi162Scf00058g01717 Petunia axillaris
Peaxi162Scf00375g00513 Petunia axillaris
PGR142G0453 Punica granatum
PGSC0003DMG401006099 Solanum tuberosum
PGSC0003DMG401026906 Solanum tuberosum
PGSC0003DMG402006099 Solanum tuberosum
PGSC0003DMG402026906 Solanum tuberosum
Phvul.005G152500 Phaseolus vulgaris
Phvul.011G055100 Phaseolus vulgaris
Potri.007G127600 Populus trichocarpa
Pp3c17_17810 Physcomitrium patens
PRCOL_00001550 Prasinoderma coloniale
Prupe.1G191600 Prunus persica
Psat1g007160 Pisum sativum
Psat7g213960 Pisum sativum
PSO675G5046 Papaver somniferum
PSO732G0278 Papaver somniferum
PSO732G0822 Papaver somniferum
QL10p048514 Quercus lobata
QL10p048520 Quercus lobata
RcHm_v2.0_Chr4g0407021 Rosa chinensis
Rhsim02G0076400 Rhododendron simsii
Rhsim02G0076600 Rhododendron simsii
Sabra07G0103600 Salix brachista
Sabra07G0103800 Salix brachista
SalBow1G3505 Salvia bowleyana
SalBow7G0323 Salvia bowleyana
SalBow7G1435 Salvia bowleyana
Sc13g0005360 Simmondsia chinensis
Sed0019525 Sechium edule
SGA_v2.0_scaffold181G39728 Striga asiatica
SHI24906 Sapria himalayana
SMO347G0587 Selaginella moellendorffii
Solyc06g073400.3 Solanum lycopersicum
Solyc09g083003.1 Solanum lycopersicum
Solyc09g083007.1 Solanum lycopersicum
Sopen06g029780 Solanum pennellii
Sopen09g031880 Solanum pennellii
Sp1g04740 Schrenkiella parvula
Sp4g13930 Schrenkiella parvula
TAR362G1164 Trochodendron aralioides
TAR636G1513 Trochodendron aralioides
THA.LOC104827388 Tarenaya hassleriana
Thecc.04G185400 Theobroma cacao
Thecc.04G185600 Theobroma cacao
Thecc.04G185700 Theobroma cacao
Thhalv10007955m.g Eutrema salsugineum
Thhalv10016815m.g Eutrema salsugineum
TPR.G34203 Trifolium pratense
TWI59G0142 Tripterygium wilfordii
unitig_8.g4603 Utricularia gibba
vmacro15647 Vaccinium macrocarpon
VMungo1127G0908 Vigna mungo
Zm00001eb406830 Zea mays

User provided reference genes

Program Settings