Gene: TWI59G0142

General Information

Structural Information

  • Species Tripterygium wilfordii
  • Gene Identifier TWI59G0142
  • Transcript Identifier TWI59G0142.01
  • Gene Type Coding gene
  • Location NC_052248.1 : 1387997-1394410 : negative

Gene Family Information

  • ID HOM05D004358
  • #Genes/#Species 164/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_038826617.1
  • id gene-LOC119982983
  • Dbxref GeneID:119982983
  • Dbxref GeneID:119982983,Genbank:XM_038826617.1
  • pid XP_038682545.1

Descriptions

  • product endonuclease III homolog 1, chloroplastic-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006284
IEA
InterProbase-excision repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0003677
IEA
InterProDNA binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0003906
ISO
PLAZA Integrative OrthologyDNA-(apurinic or apyrimidinic site) endonuclease activity AT2G31450
GO:0019104
ISO
PLAZA Integrative OrthologyDNA N-glycosylase activity AT2G31450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G31450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR003265 HhH-GPD domain
IPR000445 Helix-hairpin-helix motif
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
Mapman id Description
14.5.11 DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)