Gene: Nitab4.5_0003132g0140
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003132g0140
- Transcript Identifier Nitab4.5_0003132g0140.1
- Gene Type Coding gene
- Location Nitab4.5_0003132 : 256626-300490 : negative
Gene Family Information
- ID HOM05D004358
- #Genes/#Species 164/94
- Phylogenetic origin
- ID ORTHO05D004960
- #Genes/#Species 167/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0003132g0140.1
- SR1-identifier Nta12g12910.1
Descriptions
- Description HhH-GPD domain, Endonuclease III-like, iron-sulphur cluster loop motif, DNA glycosylase, Endonuclease III, iron-sulphur binding site, Helix-turn-helix, base-excision DNA repair, C-terminal, Helix-hairpin-helix motif
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006284 | IEA | InterPro | base-excision repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding | |
| GO:0003906 | ISO | PLAZA Integrative Orthology | DNA-(apurinic or apyrimidinic site) endonuclease activity | AT2G31450 |
| GO:0019104 | ISO | PLAZA Integrative Orthology | DNA N-glycosylase activity | AT2G31450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT2G31450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.5.11 | DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH) |