Gene: Thecc.04G185400

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G185400
  • Transcript Identifier Thecc.04G185400.2
  • Gene Type Coding gene
  • Location Chromosome_4 : 27737336-27743552 : negative

Gene Family Information

  • ID HOM05D004358
  • #Genes/#Species 164/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G185400.v2.1
  • pacid 42023458
  • ancestorIdentifier Thecc1EG020120.CGDv1.1
  • ancestorIdentifier Thecc1EG020120t2.CGDv1.1

Descriptions

  • Description DNA glycosylase superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0003906
ISO
PLAZA Integrative OrthologyDNA-(apurinic or apyrimidinic site) endonuclease activity AT2G31450
GO:0019104
ISO
PLAZA Integrative OrthologyDNA N-glycosylase activity AT2G31450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G31450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003265 HhH-GPD domain
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
IPR000445 Helix-hairpin-helix motif
IPR011257 DNA glycosylase
Mapman id Description
14.5.11 DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)