Gene: AUR62015399

General Information

Structural Information

  • Species Chenopodium quinoa
  • Gene Identifier AUR62015399
  • Transcript Identifier AUR62015399-RA
  • Gene Type Coding gene
  • Location C_Quinoa_Scaffold_2751 : 6250842-6255992 : positive

Gene Family Information

  • ID HOM05D004358
  • #Genes/#Species 164/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AUR62015399.v1.0
  • pacid 36314811
  • uniprot A0A803LM88

Descriptions

  • Description NTH1: Endonuclease III homolog 1, chloroplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006285
IEA
GOA Databasebase-excision repair, AP site formation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0003906
IEA
GOA DatabaseDNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0019104
IEA
GOA DatabaseDNA N-glycosylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G31450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR003265 HhH-GPD domain
IPR011257 DNA glycosylase
IPR000445 Helix-hairpin-helix motif
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
Mapman id Description
14.5.11 DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)