Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10450 Brassica napus
A08p30550 Brassica napus
Aa31LG6G6030 Aethionema arabicum
Aa31LG7G2980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4382 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.488 Anthoceros agrestis
Actinidia16757 Actinidia chinensis
Actinidia18908 Actinidia chinensis
Actinidia19476 Actinidia chinensis
Actinidia35112 Actinidia chinensis
Actinidia37421 Actinidia chinensis
Ah.12g060480 Amaranthus hybridus
Ah.14g086800 Amaranthus hybridus
AL1G30470 Arabidopsis lyrata
AL1G43460 Arabidopsis lyrata
Aqoxy3G03874 Aquilegia oxysepala
Aqoxy3G04014 Aquilegia oxysepala
Aqoxy4G00175 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0CW7N2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CMXS5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CS3QBI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NX7DWE Arachis hypogaea
AT1G18090 Arabidopsis thaliana
AT1G29630 Arabidopsis thaliana
AT2G02550 Arabidopsis thaliana
ATR0686G055 Amborella trichopoda
ATR0763G174 Amborella trichopoda
Atru.chr10.1471 Acer truncatum
Atru.chr9.1768 Acer truncatum
Atru.chr9.1770 Acer truncatum
Atru.chr9.958 Acer truncatum
AUR62027619 Chenopodium quinoa
AUR62029960 Chenopodium quinoa
AUR62033741 Chenopodium quinoa
AUR62035823 Chenopodium quinoa
BcaB02g11391 Brassica carinata
BcaB03g13871 Brassica carinata
BcaC06g35445 Brassica carinata
BcaC07g38906 Brassica carinata
BolC7t42094H Brassica oleracea
BolC8t49472H Brassica oleracea
BraA07t28845Z Brassica rapa
BraA08t34987Z Brassica rapa
C07p16090 Brassica napus
C08p18420 Brassica napus
CAN.G1129.26 Capsicum annuum
CAN.G257.100 Capsicum annuum
CANSAT25G2940 Cannabis sativa
CANSAT35G1314 Cannabis sativa
CANSAT80G0305 Cannabis sativa
CANSAT80G0481 Cannabis sativa
CARHR018680 Cardamine hirsuta
CARHR028950 Cardamine hirsuta
Carub.0001s1776 Capsella rubella
Carub.0001s2785 Capsella rubella
Ca_17874_v3 Cicer arietinum L.
Cc04_g06600 Coffea canephora
Cc09_g09990 Coffea canephora
CDE05G1185 Ceratophyllum demersum
CDE06G1480 Ceratophyllum demersum
Cfa001058 Carpinus fangiana
Cfa001740 Carpinus fangiana
Cfa019693 Carpinus fangiana
Cfa025809 Carpinus fangiana
Ciclev10007863m.g Citrus clementina
Ciclev10014561m.g Citrus clementina
CiPaw.09G132100 Carya illinoinensis
CiPaw.16G091200 Carya illinoinensis
ClCG03G007250 Citrullus lanatus
ClCG04G010770 Citrullus lanatus
COL.COLO4_22314 Corchorus olitorius
COL.COLO4_22817 Corchorus olitorius
COL.COLO4_26804 Corchorus olitorius
COL.COLO4_30500 Corchorus olitorius
Cpa.g.sc17.162 Carica papaya
Cpa.g.sc17.163 Carica papaya
Cpa.g.sc3.434 Carica papaya
Cpa.g.sc3.435 Carica papaya
Cre07.g353950 Chlamydomonas reinhardtii
CsaV3_1G007030 Cucumis sativus L.
CsaV3_1G032850 Cucumis sativus L.
CSS0020017 Camellia sinensis var. sinensis
CSS0020872 Camellia sinensis var. sinensis
CSS0022111 Camellia sinensis var. sinensis
CSS0022879 Camellia sinensis var. sinensis
CSS0023316 Camellia sinensis var. sinensis
CSS0025118 Camellia sinensis var. sinensis
CSS0025184 Camellia sinensis var. sinensis
CSS0029539 Camellia sinensis var. sinensis
CSS0030829 Camellia sinensis var. sinensis
CSS0035276 Camellia sinensis var. sinensis
CSS0038732 Camellia sinensis var. sinensis
CSS0044402 Camellia sinensis var. sinensis
CSS0048195 Camellia sinensis var. sinensis
DCAR_003956 Daucus carota
DCAR_014772 Daucus carota
Dinv24630 Davidia involucrata
Duzib205G1612 Durio zibethinus
Duzib235G0230 Durio zibethinus
ECA233G1730 Erigeron canadensis
ECA236G2241 Erigeron canadensis
EL10Ac5g11524 Beta vulgaris
EL10Ac8g19815 Beta vulgaris
Eucgr.B00858 Eucalyptus grandis
Eucgr.D00356 Eucalyptus grandis
Eucgr.D00367 Eucalyptus grandis
Eucgr.D00376 Eucalyptus grandis
Eucgr.H02815 Eucalyptus grandis
FAN01G2428 Fragaria x ananassa
FAN03G3081 Fragaria x ananassa
FAN04G2084 Fragaria x ananassa
FAN08G0509 Fragaria x ananassa
FAN11G1742 Fragaria x ananassa
FAN13G0058 Fragaria x ananassa
FAN16G3491 Fragaria x ananassa
FAN18G4280 Fragaria x ananassa
FAN21G3713 Fragaria x ananassa
FAN25G0150 Fragaria x ananassa
FvH4_3g06460 Fragaria vesca
FvH4_4g36910 Fragaria vesca
FvH4_5g17080 Fragaria vesca
FvH4_6g02530 Fragaria vesca
FvH4_7g04680 Fragaria vesca
Glyma.05G163700 Glycine max
Glyma.07G100600 Glycine max
Glyma.08G120900 Glycine max
Gohir.A09G051500 Gossypium hirsutum
Gohir.A10G032600 Gossypium hirsutum
Gohir.D09G052500 Gossypium hirsutum
Gohir.D10G033300 Gossypium hirsutum
Gorai.006G057100 Gossypium raimondii
Gorai.009G287600 Gossypium raimondii
Gorai.011G035100 Gossypium raimondii
GSVIVG01008397001 Vitis vinifera
GSVIVG01021316001 Vitis vinifera
HanXRQChr01g0030101 Helianthus annuus
HanXRQChr03g0087021 Helianthus annuus
HanXRQChr04g0115551 Helianthus annuus
HanXRQChr04g0115561 Helianthus annuus
HanXRQChr05g0133461 Helianthus annuus
HanXRQChr13g0408621 Helianthus annuus
Haze_05451 Corylus avellana
Haze_05454 Corylus avellana
Haze_05456 Corylus avellana
Haze_05457 Corylus avellana
Haze_06043 Corylus avellana
Haze_06048 Corylus avellana
Haze_18795 Corylus avellana
Hma1.2p1_0015F.1_g010570 Hydrangea macrophylla
Hma1.2p1_0015F.1_g010580 Hydrangea macrophylla
HPP92_017792 Vanilla planifolia
Hund02332 Selenicereus undatus
Hund17843 Selenicereus undatus
Lalb_Chr12g0204831 Lupinus albus
Lalb_Chr12g0204841 Lupinus albus
Lalb_Chr24g0398031 Lupinus albus
Lalb_Chr24g0398041 Lupinus albus
Lj1A1180T81 Lonicera japonica
Lj2g0015801 Lotus japonicus
Lj4g0026804 Lotus japonicus
Lj5C154T18 Lonicera japonica
Lsat_1_v5_gn_7_26381 Lactuca sativa
Lsat_1_v5_gn_8_1440 Lactuca sativa
Manes.14G169100 Manihot esculenta
Manes.17G062800 Manihot esculenta
Mapoly0058s0059 Marchantia polymorpha
Mapoly0124s0012 Marchantia polymorpha
MCO15G053 Micromonas commoda
MD00G1093000 Malus domestica
MD05G1293400 Malus domestica
MD10G1269500 Malus domestica
MD14G1234100 Malus domestica
Medtr0110s0050 Medicago truncatula
Medtr8g087940 Medicago truncatula
MELO3C002121.2 Cucumis melo
MELO3C002697.2 Cucumis melo
Migut.I00455 Erythranthe guttata
Migut.M00971 Erythranthe guttata
MSTRG.16192 Avicennia marina
Nitab4.5_0001158g0110 Nicotiana tabacum
Nitab4.5_0001644g0030 Nicotiana tabacum
Nitab4.5_0001644g0080 Nicotiana tabacum
Nitab4.5_0003746g0040 Nicotiana tabacum
Nitab4.5_0007383g0040 Nicotiana tabacum
Nn3g18593 Nelumbo nucifera
Nn3g20963 Nelumbo nucifera
Oeu001059.1 Olea europaea
Oeu005547.1 Olea europaea
Os01g0777300 Oryza sativa ssp. japonica
Peaxi162Scf00308g00815 Petunia axillaris
Peaxi162Scf00683g00215 Petunia axillaris
PGR083G1787 Punica granatum
PGSC0003DMG400005737 Solanum tuberosum
PGSC0003DMG400007247 Solanum tuberosum
Phvul.002G243800 Phaseolus vulgaris
Phvul.004G151700 Phaseolus vulgaris
Potri.011G077001 Populus trichocarpa
Potri.015G041400 Populus trichocarpa
Pp3c23_8000 Physcomitrium patens
Pp3c8_18140 Physcomitrium patens
PRCOL_00002355 Prasinoderma coloniale
PRCOL_00004629 Prasinoderma coloniale
Prupe.4G072200 Prunus persica
Prupe.5G230300 Prunus persica
Psat1g032440 Pisum sativum
Psat7g066200 Pisum sativum
PSO541G3031 Papaver somniferum
PSO675G2539 Papaver somniferum
QL05p052775 Quercus lobata
QL10p027611 Quercus lobata
RcHm_v2.0_Chr1g0342681 Rosa chinensis
RcHm_v2.0_Chr4g0385031 Rosa chinensis
RcHm_v2.0_Chr5g0012821 Rosa chinensis
RcHm_v2.0_Chr5g0012831 Rosa chinensis
RcHm_v2.0_Chr7g0178771 Rosa chinensis
Rhsim12G0139800 Rhododendron simsii
Sabra15G0055700 Salix brachista
Sabra15G0063300 Salix brachista
SalBow5G0924 Salvia bowleyana
SalBow5G3867 Salvia bowleyana
SalBow8G0847 Salvia bowleyana
SalBow8G3031 Salvia bowleyana
Sc10g0009290 Simmondsia chinensis
Sc24g0001920 Simmondsia chinensis
Sed0008006 Sechium edule
Sed0024498 Sechium edule
SEGI_36210 Sequoiadendron giganteum
SEGI_39257 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00119 Striga asiatica
SHI19402 Sapria himalayana
SHI19408 Sapria himalayana
SHI19411 Sapria himalayana
SMO174G0195 Selaginella moellendorffii
Solyc02g071530.2 Solanum lycopersicum
Solyc03g119070.2 Solanum lycopersicum
Sopen02g020560 Solanum pennellii
Sopen03g037960 Solanum pennellii
Sp1g16110 Schrenkiella parvula
Sp1g25530 Schrenkiella parvula
TAR624G1252 Trochodendron aralioides
TAR629G1583 Trochodendron aralioides
THA.LOC104812654 Tarenaya hassleriana
THA.LOC104813917 Tarenaya hassleriana
Thecc.03G047600 Theobroma cacao
Thecc.06G159700 Theobroma cacao
Thhalv10006968m.g Eutrema salsugineum
Thhalv10007197m.g Eutrema salsugineum
TPR.G1475 Trifolium pratense
TPR.G6726 Trifolium pratense
TWI09G1585 Tripterygium wilfordii
TWI81G0397 Tripterygium wilfordii
unitig_32.g11096 Utricularia gibba
unitig_32.g11097 Utricularia gibba
unitig_32.g11098 Utricularia gibba
vmacro03988 Vaccinium macrocarpon
vmacro16424 Vaccinium macrocarpon
vmacro16425 Vaccinium macrocarpon
VMungo0251G0317 Vigna mungo
VMungo0251G0960 Vigna mungo
VMungo0251G2536 Vigna mungo
VMungo0464G0918 Vigna mungo
Zm00001eb151620 Zea mays

User provided reference genes

Program Settings