Gene: Pp3c23_8000

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_8000
  • Transcript Identifier Pp3c23_8000V3.1
  • Gene Type Coding gene
  • Location Chr23 : 5352989-5357946 : positive

Gene Family Information

  • ID HOM05D002606
  • #Genes/#Species 262/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_8000V3.1
  • pacid 32949897
  • alias Phypa_66378
  • alias Pp1s10_231V6
  • alias Phypa_114516
  • uniprot A0A2K1IIF3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017108
IBA
GOA Database5'-flap endonuclease activity
GO:0016788
IEA
GOA Databasehydrolase activity, acting on ester bonds
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0035312
IEA
GOA Database5'-3' exodeoxyribonuclease activity
GO:0035312
IEA
InterPro5'-3' exodeoxyribonuclease activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037315 Exonuclease-1, H3TH domain
IPR006085 XPG, N-terminal
IPR032641 Exonuclease 1
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
IPR029060 PIN-like domain superfamily
IPR044752 Exonuclease 1-like, PIN-like domain
IPR006084 XPG/Rad2 endonuclease
IPR006086 XPG-I domain
IPR008918 Helix-hairpin-helix motif, class 2
Mapman id Description
14.3.4 DNA damage response.homologous recombination repair (HR).exonuclease (EXO1)