Gene: vmacro16425

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro16425
Transcript Identifier vmacro16425-RA
Gene Type Coding gene
Location chr4_Vaccinium_macrocarpon_Stevens_v1 : 9118640-9122283 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002606
#Genes/#Species 262/98
Phylogenetic origin

ID ORTHO05D003016
#Genes/#Species 248/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id vmacro16425_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to EXO1: Exonuclease 1 (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006281	ISO	PLAZA Homology (enrichment)	DNA repair	HOM05D002606

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004518	IEA	InterPro	nuclease activity
GO:0003677	IEA	InterPro	DNA binding
GO:0003824	IEA	InterPro	catalytic activity
GO:0046872	IEA	InterPro	metal ion binding
GO:0035312	ISO	PLAZA Homology (enrichment)	5'-3' exodeoxyribonuclease activity	HOM05D002606

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036279	5'-3' exonuclease, C-terminal domain superfamily
IPR006085	XPG, N-terminal
IPR006084	XPG/Rad2 endonuclease
IPR008918	Helix-hairpin-helix motif, class 2
IPR029060	PIN-like domain superfamily
IPR006086	XPG-I domain
IPR044752	Exonuclease 1-like, PIN-like domain

Mapman id	Description
14.3.4	DNA damage response.homologous recombination repair (HR).exonuclease (EXO1)