Gene: AL1G30470

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL1G30470
  • Transcript Identifier AL1G30470.t1
  • Gene Type Coding gene
  • Location scaffold_1 : 7598121-7601372 : positive

Gene Family Information

  • ID HOM05D002606
  • #Genes/#Species 262/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL1G30470.v2.1
  • synonym 920735
  • synonym scaffold_102016.1
  • pacid 35931065

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Homology (enrichment)DNA repair HOM05D002606

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0004518
IEA
InterPronuclease activity
GO:0046872
IEA
InterPrometal ion binding
GO:0035312
ISO
PLAZA Homology (enrichment)5'-3' exodeoxyribonuclease activity HOM05D002606

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
IPR006084 XPG/Rad2 endonuclease
IPR008918 Helix-hairpin-helix motif, class 2
IPR006085 XPG, N-terminal
IPR044752 Exonuclease 1-like, PIN-like domain
IPR029060 PIN-like domain superfamily
IPR006086 XPG-I domain
Mapman id Description
14.3.4 DNA damage response.homologous recombination repair (HR).exonuclease (EXO1)