Gene: CSS0035276
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0035276
- Transcript Identifier CSS0035276.1
- Gene Type Coding gene
- Location Chr8 : 68120600-68147735 : negative
Gene Family Information
- ID HOM05D002606
- #Genes/#Species 262/98
- Phylogenetic origin
- ID ORTHO05D003016
- #Genes/#Species 248/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0035276.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0035312 | IEA | InterPro | 5'-3' exodeoxyribonuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037315 | Exonuclease-1, H3TH domain |
| IPR006085 | XPG, N-terminal |
| IPR044752 | Exonuclease 1-like, PIN-like domain |
| IPR006086 | XPG-I domain |
| IPR032641 | Exonuclease 1 |
| IPR008918 | Helix-hairpin-helix motif, class 2 |
| IPR006084 | XPG/Rad2 endonuclease |
| IPR029060 | PIN-like domain superfamily |
| IPR036279 | 5'-3' exonuclease, C-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 14.3.4 | DNA damage response.homologous recombination repair (HR).exonuclease (EXO1) |