Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04840 Brassica napus
A02p14090 Brassica napus
A02p15350 Brassica napus
A06p08530 Brassica napus
A07p33840 Brassica napus
A07p35170 Brassica napus
A09p09150 Brassica napus
Aa31LG1G1390 Aethionema arabicum
Aa31LG1G16300 Aethionema arabicum
Aa31LG2G3600 Aethionema arabicum
Aa31LG2G3610 Aethionema arabicum
Aa31sc79G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5167 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.551 Anthoceros agrestis
Actinidia11953 Actinidia chinensis
Actinidia13686 Actinidia chinensis
Actinidia13687 Actinidia chinensis
Actinidia13688 Actinidia chinensis
Actinidia14837 Actinidia chinensis
Actinidia14838 Actinidia chinensis
Actinidia14839 Actinidia chinensis
Actinidia16605 Actinidia chinensis
Actinidia17619 Actinidia chinensis
Actinidia26291 Actinidia chinensis
Actinidia26292 Actinidia chinensis
Actinidia36410 Actinidia chinensis
Actinidia36411 Actinidia chinensis
Actinidia38404 Actinidia chinensis
Ah.03g138000 Amaranthus hybridus
Ah.10g037470 Amaranthus hybridus
Ah.16g102090 Amaranthus hybridus
AL1G24910 Arabidopsis lyrata
AL2G25750 Arabidopsis lyrata
AL2G27740 Arabidopsis lyrata
AL6G50880 Arabidopsis lyrata
AL8G43490 Arabidopsis lyrata
Aqoxy3G00643 Aquilegia oxysepala
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala
Aqoxy3G03368 Aquilegia oxysepala
Aqoxy5G00825 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15YI41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4CMW6X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4FD4U0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90HUEH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98QD99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AYA763 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CP8NJF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGXB7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0PK62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EA1KYK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EMYT0X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLH8ZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JN41X7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PL6B48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3TKD3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SERK2X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8DCP7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPT71U Arachis hypogaea
AT1G13220 Arabidopsis thaliana
AT1G67230 Arabidopsis thaliana
AT1G68790 Arabidopsis thaliana
AT5G65770 Arabidopsis thaliana
AT5G65780 Arabidopsis thaliana
ATR0598G143 Amborella trichopoda
ATR0807G122 Amborella trichopoda
Atru.chr11.1383 Acer truncatum
Atru.chr11.1384 Acer truncatum
Atru.chr3.1079 Acer truncatum
Atru.chr6.468 Acer truncatum
Atru.chr6.469 Acer truncatum
Atru.chr8.798 Acer truncatum
AUR62002935 Chenopodium quinoa
AUR62003155 Chenopodium quinoa
AUR62007744 Chenopodium quinoa
AUR62007977 Chenopodium quinoa
AUR62008955 Chenopodium quinoa
BcaB03g15212 Brassica carinata
BcaB04g20027 Brassica carinata
BcaB05g24249 Brassica carinata
BcaB05g24250 Brassica carinata
BcaB05g24411 Brassica carinata
BcaC01g02835 Brassica carinata
BcaC03g14819 Brassica carinata
BcaC03g14987 Brassica carinata
BcaC04g23249 Brassica carinata
BcaC06g31708 Brassica carinata
BcaC08g46149 Brassica carinata
BolC2t08423H Brassica oleracea
BolC2t08598H Brassica oleracea
BolC3t18254H Brassica oleracea
BolC5t29759H Brassica oleracea
BolC6t39131H Brassica oleracea
BolC9t53964H Brassica oleracea
BraA02t06472Z Brassica rapa
BraA02t06595Z Brassica rapa
BraA06t24048Z Brassica rapa
BraA07t31010Z Brassica rapa
BraA09t36567Z Brassica rapa
C02p22700 Brassica napus
C02p25200 Brassica napus
C02p41450 Brassica napus
C03p59890 Brassica napus
C05p10130 Brassica napus
C05p31320 Brassica napus
C06p43050 Brassica napus
C09p10670 Brassica napus
CAN.G1343.20 Capsicum annuum
CAN.G153.19 Capsicum annuum
CAN.G497.7 Capsicum annuum
CANSAT01G3006 Cannabis sativa
CANSAT11G1821 Cannabis sativa
CANSAT64G1104 Cannabis sativa
CARHR013600 Cardamine hirsuta
CARHR059690 Cardamine hirsuta
CARHR061610 Cardamine hirsuta
CARHR279770 Cardamine hirsuta
Carub.0001s1295 Capsella rubella
Carub.0002s1351 Capsella rubella
Carub.0002s1535 Capsella rubella
Carub.0008s2667 Capsella rubella
Ca_04307_v3 Cicer arietinum L.
Ca_22089_v3 Cicer arietinum L.
Ca_26149_v3 Cicer arietinum L.
Ca_26150_v3 Cicer arietinum L.
CBR_g27897 Chara braunii
Cc07_g05040 Coffea canephora
Cc07_g07520 Coffea canephora
Cc11_g10760 Coffea canephora
CDE04G2677 Ceratophyllum demersum
CDE06G1107 Ceratophyllum demersum
CDE06G2305 Ceratophyllum demersum
CDE06G2647 Ceratophyllum demersum
CDE07G1053 Ceratophyllum demersum
CDE07G1824 Ceratophyllum demersum
CDE10G1132 Ceratophyllum demersum
CDE10G1177 Ceratophyllum demersum
Cfa007959 Carpinus fangiana
Cfa009251 Carpinus fangiana
Cfa018650 Carpinus fangiana
Ciclev10013467m.g Citrus clementina
Ciclev10024751m.g Citrus clementina
Ciclev10030538m.g Citrus clementina
CiPaw.03G005400 Carya illinoinensis
CiPaw.04G003600 Carya illinoinensis
CiPaw.07G038400 Carya illinoinensis
CiPaw.08G149100 Carya illinoinensis
CiPaw.15G002200 Carya illinoinensis
ClCG01G005770 Citrullus lanatus
ClCG01G017910 Citrullus lanatus
ClCG11G005290 Citrullus lanatus
COL.COLO4_09721 Corchorus olitorius
COL.COLO4_09722 Corchorus olitorius
COL.COLO4_16205 Corchorus olitorius
Cpa.g.c42160 Carica papaya
Cpa.g.sc1.235 Carica papaya
Cpa.g.sc129.57 Carica papaya
Cpa.g.sc179.33 Carica papaya
Cpa.g.sc4.201 Carica papaya
CsaV3_5G028920 Cucumis sativus L.
CsaV3_5G039060 Cucumis sativus L.
CsaV3_6G044430 Cucumis sativus L.
CSS0006423 Camellia sinensis var. sinensis
CSS0008216 Camellia sinensis var. sinensis
CSS0008376 Camellia sinensis var. sinensis
CSS0016620 Camellia sinensis var. sinensis
CSS0018350 Camellia sinensis var. sinensis
CSS0019307 Camellia sinensis var. sinensis
CSS0028126 Camellia sinensis var. sinensis
CSS0029331 Camellia sinensis var. sinensis
CSS0046282 Camellia sinensis var. sinensis
DCAR_007220 Daucus carota
DCAR_007520 Daucus carota
DCAR_010974 Daucus carota
DCAR_021833 Daucus carota
DCAR_025832 Daucus carota
DCAR_030093 Daucus carota
Dinv05807 Davidia involucrata
Dinv16523 Davidia involucrata
Dinv23061 Davidia involucrata
Dinv26969 Davidia involucrata
Dinv26970 Davidia involucrata
Dinv34858 Davidia involucrata
Dinv34859 Davidia involucrata
Duzib138G0922 Durio zibethinus
Duzib147G1298 Durio zibethinus
Duzib251G0529 Durio zibethinus
Duzib264G0128 Durio zibethinus
ECA232G1830 Erigeron canadensis
ECA234G0497 Erigeron canadensis
ECA238G3630 Erigeron canadensis
EL10Ac2g04618 Beta vulgaris
EL10Ac6g14522 Beta vulgaris
EL10Ac6g14944 Beta vulgaris
Eucgr.A00773 Eucalyptus grandis
Eucgr.G02361 Eucalyptus grandis
Eucgr.I00661 Eucalyptus grandis
Eucgr.J01462 Eucalyptus grandis
FAN02G0241 Fragaria x ananassa
FAN05G5792 Fragaria x ananassa
FAN07G2260 Fragaria x ananassa
FAN09G4253 Fragaria x ananassa
FAN12G3823 Fragaria x ananassa
FAN14G3399 Fragaria x ananassa
FAN17G1780 Fragaria x ananassa
FAN19G2689 Fragaria x ananassa
FAN22G2204 Fragaria x ananassa
FAN23G0417 Fragaria x ananassa
FAN26G2388 Fragaria x ananassa
FAN28G2309 Fragaria x ananassa
FvH4_1g18512 Fragaria vesca
FvH4_4g28241 Fragaria vesca
FvH4_6g45461 Fragaria vesca
Glyma.01G090002 Glycine max
Glyma.01G090102 Glycine max
Glyma.01G196400 Glycine max
Glyma.02G101800 Glycine max
Glyma.05G109300 Glycine max
Glyma.08G256300 Glycine max
Glyma.11G045200 Glycine max
Glyma.17G157900 Glycine max
Glyma.18G280500 Glycine max
Gohir.A02G148800 Gossypium hirsutum
Gohir.A05G393701 Gossypium hirsutum
Gohir.A07G164400 Gossypium hirsutum
Gohir.A07G164500 Gossypium hirsutum
Gohir.A11G161100 Gossypium hirsutum
Gohir.A11G211100 Gossypium hirsutum
Gohir.A12G172400 Gossypium hirsutum
Gohir.A13G086580 Gossypium hirsutum
Gohir.D03G031500 Gossypium hirsutum
Gohir.D03G055400 Gossypium hirsutum
Gohir.D07G179800 Gossypium hirsutum
Gohir.D11G167400 Gossypium hirsutum
Gohir.D11G212000 Gossypium hirsutum
Gohir.D12G174900 Gossypium hirsutum
Gorai.001G200600 Gossypium raimondii
Gorai.003G033100 Gossypium raimondii
Gorai.007G178500 Gossypium raimondii
Gorai.007G227800 Gossypium raimondii
Gorai.008G187500 Gossypium raimondii
GSVIVG01007428001 Vitis vinifera
GSVIVG01011972001 Vitis vinifera
GSVIVG01031076001 Vitis vinifera
HanXRQChr07g0200201 Helianthus annuus
HanXRQChr09g0261551 Helianthus annuus
HanXRQChr14g0452321 Helianthus annuus
HanXRQChr14g0452361 Helianthus annuus
HanXRQChr16g0528821 Helianthus annuus
HanXRQChr17g0567751 Helianthus annuus
Haze_03970 Corylus avellana
Haze_14110 Corylus avellana
Haze_14112 Corylus avellana
Haze_17417 Corylus avellana
Hma1.2p1_0136F.1_g062050 Hydrangea macrophylla
Hma1.2p1_0477F.1_g161000 Hydrangea macrophylla
Hma1.2p1_0477F.1_g161010 Hydrangea macrophylla
Hma1.2p1_0477F.1_g161020 Hydrangea macrophylla
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla
HPP92_017692 Vanilla planifolia
HPP92_021838 Vanilla planifolia
HPP92_021839 Vanilla planifolia
HPP92_024702 Vanilla planifolia
Hund05774 Selenicereus undatus
Hund13740 Selenicereus undatus
Hund16591 Selenicereus undatus
Hund25112 Selenicereus undatus
Lalb_Chr04g0255011 Lupinus albus
Lalb_Chr09g0335511 Lupinus albus
Lalb_Chr16g0379031 Lupinus albus
Lalb_Chr17g0336541 Lupinus albus
Lj1g0026501 Lotus japonicus
Lj2g0006914 Lotus japonicus
Lj4A168T50 Lonicera japonica
Lj4g0025248 Lotus japonicus
Lj6C767T7 Lonicera japonica
Lj6C767T8 Lonicera japonica
Lj7A9G80 Lonicera japonica
Lsat_1_v5_gn_2_86661 Lactuca sativa
Lsat_1_v5_gn_4_159441 Lactuca sativa
Lsat_1_v5_gn_4_19300 Lactuca sativa
Manes.01G107600 Manihot esculenta
Manes.06G074000 Manihot esculenta
Manes.12G118800 Manihot esculenta
Manes.13G107600 Manihot esculenta
Mapoly0160s0011 Marchantia polymorpha
MBI16_g11022_MAGBIO Magnolia biondii
MBI16_g11023_MAGBIO Magnolia biondii
MD02G1191400 Malus domestica
MD09G1082900 Malus domestica
MD13G1048500 Malus domestica
MD15G1302600 Malus domestica
MD16G1049800 Malus domestica
Medtr4g097580 Medicago truncatula
Medtr5g052150 Medicago truncatula
Medtr5g052200 Medicago truncatula
Medtr6g015270 Medicago truncatula
Medtr6g015285 Medicago truncatula
Medtr7g018610 Medicago truncatula
Medtr7g116170 Medicago truncatula
MELO3C005352.2 Cucumis melo
MELO3C007665.2 Cucumis melo
MELO3C022065.2 Cucumis melo
Migut.H00316 Erythranthe guttata
Migut.H00533 Erythranthe guttata
Migut.L01107 Erythranthe guttata
MSTRG.23648 Avicennia marina
MSTRG.23825 Avicennia marina
MSTRG.2942 Avicennia marina
MSTRG.810 Avicennia marina
Nitab4.5_0000597g0010 Nicotiana tabacum
Nitab4.5_0002390g0010 Nicotiana tabacum
Nitab4.5_0003461g0040 Nicotiana tabacum
Nitab4.5_0003478g0030 Nicotiana tabacum
Nitab4.5_0003990g0020 Nicotiana tabacum
Nitab4.5_0004420g0060 Nicotiana tabacum
Nitab4.5_0004487g0020 Nicotiana tabacum
Nitab4.5_0009272g0010 Nicotiana tabacum
Nn3g17678 Nelumbo nucifera
Nn4g23682 Nelumbo nucifera
Nn6g34551 Nelumbo nucifera
Oeu007110.3 Olea europaea
Oeu041875.1 Olea europaea
Oeu061811.2 Olea europaea
Os01g0767000 Oryza sativa ssp. japonica
Os02g0709900 Oryza sativa ssp. japonica
Os02g0710102 Oryza sativa ssp. japonica
Peaxi162Scf00004g10118 Petunia axillaris
Peaxi162Scf00096g01717 Petunia axillaris
Peaxi162Scf00479g00119 Petunia axillaris
Peaxi162Scf01056g00241 Petunia axillaris
PGR004G0636 Punica granatum
PGR042G1271 Punica granatum
PGR119G1444 Punica granatum
PGSC0003DMG400003363 Solanum tuberosum
PGSC0003DMG400021400 Solanum tuberosum
PGSC0003DMG402010047 Solanum tuberosum
Phvul.003G025500 Phaseolus vulgaris
Phvul.003G232200 Phaseolus vulgaris
Phvul.008G020600 Phaseolus vulgaris
Potri.008G114800 Populus trichocarpa
Potri.012G034300 Populus trichocarpa
Potri.015G024900 Populus trichocarpa
Potri.017G111400 Populus trichocarpa
Pp3c1_1360 Physcomitrium patens
Pp3c2_34830 Physcomitrium patens
Prupe.1G303700 Prunus persica
Prupe.3G240800 Prunus persica
Prupe.6G214100 Prunus persica
Psat1g067200 Pisum sativum
Psat3g191560 Pisum sativum
Psat4g080640 Pisum sativum
PSO017G3294 Papaver somniferum
PSO017G3961 Papaver somniferum
PSO017G4742 Papaver somniferum
PSO063G3921 Papaver somniferum
PSO170G4358 Papaver somniferum
PSO478G2613 Papaver somniferum
PSO832G1490 Papaver somniferum
QL01p000940 Quercus lobata
QL01p000944 Quercus lobata
QL01p000954 Quercus lobata
QL02p053039 Quercus lobata
QL06p038381 Quercus lobata
RcHm_v2.0_Chr2g0109151 Rosa chinensis
RcHm_v2.0_Chr2g0163401 Rosa chinensis
RcHm_v2.0_Chr4g0436081 Rosa chinensis
RcHm_v2.0_Chr4g0436091 Rosa chinensis
RcHm_v2.0_Chr4g0436101 Rosa chinensis
RcHm_v2.0_Chr7g0226101 Rosa chinensis
Rhsim06G0209200 Rhododendron simsii
Rhsim08G0079900 Rhododendron simsii
Rhsim10G0092900 Rhododendron simsii
Rhsim12G0080700 Rhododendron simsii
Sabra08G0087000 Salix brachista
Sabra12G0023500 Salix brachista
SalBow1G0002 Salvia bowleyana
SalBow1G5670 Salvia bowleyana
SalBow1G6161 Salvia bowleyana
SalBow3G2766 Salvia bowleyana
SalBow8G4999 Salvia bowleyana
Sc11g0002990 Simmondsia chinensis
Sc11g0008120 Simmondsia chinensis
Sc16g0000890 Simmondsia chinensis
Sed0000445 Sechium edule
Sed0011516 Sechium edule
Sed0013236 Sechium edule
Sed0017705 Sechium edule
Sed0021007 Sechium edule
Sed0026492 Sechium edule
SEGI_02593 Sequoiadendron giganteum
SEGI_18919 Sequoiadendron giganteum
SEGI_31543 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33074 Striga asiatica
SGA_v2.0_scaffold204G41653 Striga asiatica
SGA_v2.0_scaffold335G49141 Striga asiatica
SGA_v2.0_scaffold36G14511 Striga asiatica
SMO223G0040 Selaginella moellendorffii
Solyc02g089800.3 Solanum lycopersicum
Solyc02g091960.4 Solanum lycopersicum
Solyc03g045050.4 Solanum lycopersicum
Sopen02g034490 Solanum pennellii
Sopen02g036530 Solanum pennellii
Sopen03g009490 Solanum pennellii
Sp1g11740 Schrenkiella parvula
Sp2g28870 Schrenkiella parvula
Sp5g22170 Schrenkiella parvula
TAR371G0717 Trochodendron aralioides
TAR381G1251 Trochodendron aralioides
TAR622G0233 Trochodendron aralioides
TAR622G0904 Trochodendron aralioides
TAR622G0959 Trochodendron aralioides
TAR625G0235 Trochodendron aralioides
TAR629G0360 Trochodendron aralioides
TAR629G1671 Trochodendron aralioides
TAR629G1866 Trochodendron aralioides
THA.LOC104805555 Tarenaya hassleriana
THA.LOC104815216 Tarenaya hassleriana
THA.LOC104822178 Tarenaya hassleriana
THA.LOC104822710 Tarenaya hassleriana
THA.LOC104825719 Tarenaya hassleriana
THA.LOC104826508 Tarenaya hassleriana
Thecc.01G078400 Theobroma cacao
Thecc.02G363000 Theobroma cacao
Thecc.04G140200 Theobroma cacao
Thhalv10003578m.g Eutrema salsugineum
Thhalv10006601m.g Eutrema salsugineum
Thhalv10018034m.g Eutrema salsugineum
Thhalv10019562m.g Eutrema salsugineum
TPR.G10013 Trifolium pratense
TPR.G3699 Trifolium pratense
TPR.G4495 Trifolium pratense
TWI31G0763 Tripterygium wilfordii
TWI31G1272 Tripterygium wilfordii
TWI53G1363 Tripterygium wilfordii
TWI63G0078 Tripterygium wilfordii
TWI74G0426 Tripterygium wilfordii
TWI77G0068 Tripterygium wilfordii
TWI79G1631 Tripterygium wilfordii
unitig_0.g494 Utricularia gibba
unitig_22.g6546 Utricularia gibba
unitig_8.g3263 Utricularia gibba
unitig_8.g3264 Utricularia gibba
unitig_899.g15128 Utricularia gibba
vmacro01359 Vaccinium macrocarpon
vmacro05373 Vaccinium macrocarpon
vmacro05374 Vaccinium macrocarpon
vmacro18103 Vaccinium macrocarpon
VMungo0251G3305 Vigna mungo
VMungo1215G1277 Vigna mungo
VMungo1383G0213 Vigna mungo
Zm00001eb152080 Zea mays
Zm00001eb188670 Zea mays
Zm00001eb252350 Zea mays
Zm00001eb288610 Zea mays

User provided reference genes

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